RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 KCNA1Q09470 495 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 UGCGQ16739 394 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ASTE1Q2TB18 679 aaPredicted RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 TREML2Q5T2D2 321 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SMYD5Q6GMV2 418 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 METTL7BQ6UX53 244 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 RSRC2Q7L4I2 434 aaKnown RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 ENOSF1Q7L5Y1 443 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 DEPTORQ8TB45 409 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SEPT1Q8WYJ6 367 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 POMGNT1Q8WZA1 660 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 TAF4BQ92750 862 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 KCNN1Q92952 543 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SLC10A4Q96EP9 437 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 MMP19Q99542 508 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
PNKP-231ENST00000640501 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
PNKP-231ENST00000640501 A0A0A6YYK5 440 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 GLTPD2A6NH11 291 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 ZC3H11AO75152 810 aaKnown RBP eCLIP9.03□□□□□ -0.96
PNKP-231ENST00000640501 PLEKP08567 350 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 CETPP11597 493 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 H2AFXP16104 143 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 CNGA1P29973 690 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 STAT5BP51692 787 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 EFNA5P52803 228 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 MFAP3P55082 362 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 JAM2P57087 298 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 SP4Q02446 784 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 EMC2Q15006 297 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 SNRNP35Q16560 246 aaKnown RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 MTERF2Q49AM1 385 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 PLA2G4FQ68DD2 849 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 KRT39Q6A163 491 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 PPP1R2P3Q6NXS1 205 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 CCDC60Q8IWA6 550 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 TMEM161BQ8NDZ6 487 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 AFAP1L1Q8TED9 768 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 CTNNBL1Q8WYA6 563 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 TSC1Q92574 1164 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 SELENOOQ9BVL4 669 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 POLR3FQ9H1D9 316 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 C2orf40Q9H1Z8 148 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
PNKP-231ENST00000640501 ADAMTS1Q9UHI8 967 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 PUF60Q9UHX1 559 aaKnown RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 SNX12Q9UMY4 172 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 FZD1Q9UP38 647 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
PNKP-231ENST00000640501 V9GYY5 206 aaPredicted RBP9.03□□□□□ -0.96
PNKP-231ENST00000640501 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 TARSL2A2RTX5 802 aaKnown RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 ZNF233A6NK53 670 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 F8VZ95 297 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 K7ERI5 159 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 CES2O00748 559 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 RGS20O76081 388 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 H2AFZP0C0S5 128 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 TNFAIP3P21580 790 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 UBA1P22314 1058 aaKnown RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 GCLCP48506 637 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 GTF2A2P52657 109 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 AP3M2P53677 418 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 NPEPPSP55786 919 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 AMPD2Q01433 879 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 PTK2Q05397 1052 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 TFDP1Q14186 410 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 MXD4Q14582 209 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 SURF1Q15526 300 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 GPR162Q16538 588 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 CFAP221Q4G0U5 840 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 ALKBH5Q6P6C2 394 aaKnown RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 FBXO38Q6PIJ6 1188 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 H2AFVQ71UI9 128 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 IRF2BP2Q7Z5L9 587 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 ZBTB8OSQ8IWT0 167 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 BBXQ8WY36 941 aaPredicted RBP9.02□□□□□ -0.97
PNKP-231ENST00000640501 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 LACRTQ9GZZ8 138 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 PORCNQ9H237 461 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 PCIF1Q9H4Z3 704 aa9.02□□□□□ -0.97
PNKP-231ENST00000640501 TMEM8AQ9HCN3 771 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms