RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	KNOP1	Q1ED39	458 aa	Known RBP	19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	DEPTOR	Q8TB45	409 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	ENOX1	Q8TC92	643 aa	Known RBP	19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	EEF2KMT	Q96G04	330 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	MAP7D2	Q96T17	732 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	MINDY3	Q9H8M7	445 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	TRMT13	Q9NUP7	481 aa	Known RBP	19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	TBX20	Q9UMR3	447 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421	USP20	Q9Y2K6	914 aa		19.53	■□□□□ 0.72
SPIN3-238	ENST00000640421		A0A087WZ62	844 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	TISP43	B9A030	160 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	GJA8	P48165	433 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	GPC3	P51654	580 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	NLRP11	P59045	1033 aa	Known RBP	19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	SERINC5	Q86VE9	423 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	MAP4K3	Q8IVH8	894 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	SLC17A8	Q8NDX2	589 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	FDXACB1	Q9BRP7	624 aa	Predicted RBP	19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	CCDC113	Q9H0I3	377 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	UBE4B	O95155	1302 aa		19.52	■□□□□ 0.72
SPIN3-238	ENST00000640421	IKBKB	O14920	756 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	ASAP2	O43150	1006 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	CSDE1	O75534	798 aa	Known RBP	19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	ALCAM	Q13740	583 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	PTGIS	Q16647	500 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	KIZ	Q2M2Z5	673 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	DIS3L	Q8TF46	1054 aa	Known RBP	19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	KCNN1	Q92952	543 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	ADAMTS10	Q9H324	1103 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	CDHR5	Q9HBB8	845 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421	NFE2L3	Q9Y4A8	694 aa		19.52	■□□□□ 0.71
SPIN3-238	ENST00000640421		A0A0U1RQG5	324 aa	Predicted RBP	19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	TTLL13P	A6NNM8	815 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	GPR32	O75388	356 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	IQCF3	P0C7M6	154 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	PTEN	P60484	403 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	HSP90AA4P	Q58FG1	418 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	STXBP4	Q6ZWJ1	553 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	SAMSN1	Q9NSI8	373 aa	Known RBP	19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	FANCL	Q9NW38	375 aa		19.51	■□□□□ 0.71
SPIN3-238	ENST00000640421	GOLGA6L3	A6NEY3	463 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	BECN2	A8MW95	431 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	KIF20A	O95235	890 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	PTPN11	Q06124	597 aa	Predicted RBP	19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	TFDP1	Q14186	410 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	SPATA1	Q5VX52	437 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	TAF2	Q6P1X5	1199 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	SLC39A4	Q6P5W5	647 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	DHX38	Q92620	1227 aa	Known RBP	19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	ACCS	Q96QU6	501 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	TRPV6	Q9H1D0	765 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	ARVCF	O00192	962 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	PDXK	O00764	312 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	B4GALT4	O60513	344 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	CDK7	P50613	346 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	MBTD1	Q05BQ5	628 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	NLRP7	Q8WX94	980 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	HVCN1	Q96D96	273 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	NFKBIZ	Q9BYH8	718 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	SENP6	Q9GZR1	1112 aa	Predicted RBP	19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	TYW1	Q9NV66	732 aa	Known RBP	19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	KCNG1	Q9UIX4	513 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	TRAF3IP3	Q9Y228	551 aa		19.5	■□□□□ 0.71
SPIN3-238	ENST00000640421	PHLPP2	Q6ZVD8	1323 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	ANKRD63	C9JTQ0	380 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421		H0YCG3	227 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421		K7ERI5	159 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	LRRC63	Q05C16	580 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	POU5F1B	Q06416	359 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	LRRC55	Q6ZSA7	311 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	IFNLR1	Q8IU57	520 aa	Predicted RBP	19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	GBP3	Q9H0R5	595 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	TMEM134	Q9H6X4	195 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	GINS2	Q9Y248	185 aa		19.49	■□□□□ 0.71
SPIN3-238	ENST00000640421	BICDL2	A1A5D9	508 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	CLIC2	O15247	247 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	COL6A1	P12109	1028 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	ATP1A3	P13637	1013 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	PHKA2	P46019	1235 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	EFNA5	P52803	228 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	ZNF410	Q86VK4	478 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	IRF2BP1	Q8IU81	584 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	SYCP3	Q8IZU3	236 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	TMEM40	Q8WWA1	233 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	OSMR	Q99650	979 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	TMEM206	Q9H813	350 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	GRPEL1	Q9HAV7	217 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	AGPAT3	Q9NRZ7	376 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	SMTNL1	A8MU46	457 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	ZNF18	P17022	549 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	TRIM71	Q2Q1W2	868 aa	Known RBP	19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	ZBTB8OS	Q8IWT0	167 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	CSGALNACT2	Q8N6G5	542 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	SCLT1	Q96NL6	688 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	SRRT	Q9BXP5	876 aa	Known RBP	19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	C2orf40	Q9H1Z8	148 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	FZD8	Q9H461	694 aa		19.48	■□□□□ 0.71
SPIN3-238	ENST00000640421	INO80B-WBP1	J3KQ70	363 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	B4GALT5	O43286	388 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	AP5Z1	O43299	807 aa		19.47	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms