RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MBTD1Q05BQ5 628 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 DMP1Q13316 513 aaPredicted RBP14.58□□□□□ -0.08
GTF3A-209ENST00000640289 CUL4BQ13620 913 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 ODR4Q5SWX8 454 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 MYCT1Q8N699 235 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 CNNM3Q8NE01 707 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 LINC01599Q8WXQ3 324 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 HERVK_113Q902F9 699 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 APBB2Q92870 758 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 GBP4Q96PP9 640 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 C7orf25Q9BPX7 421 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 NFKBIZQ9BYH8 718 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 PARVGQ9HBI0 331 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 KMT5AQ9NQR1 393 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
GTF3A-209ENST00000640289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.57□□□□□ -0.08
GTF3A-209ENST00000640289 NR1I2O75469 434 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 EDN1P05305 212 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 UBE2HP62256 183 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 ASIC1P78348 528 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 AMPD3Q01432 767 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 IKBKEQ14164 716 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 AMHR2Q16671 573 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.57□□□□□ -0.081e-6■■■■□ 21.8
GTF3A-209ENST00000640289 RTN4RL1Q86UN2 441 aaPredicted RBP14.57□□□□□ -0.08
GTF3A-209ENST00000640289 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 ZBTB8OSQ8IWT0 167 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 RNPC3Q96LT9 517 aaKnown RBP14.57□□□□□ -0.08
GTF3A-209ENST00000640289 FIZ1Q96SL8 496 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 LRRC27Q9C0I9 530 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 CCDC113Q9H0I3 377 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 C17orf75Q9HAS0 396 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 LMBRD1Q9NUN5 540 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
GTF3A-209ENST00000640289 USP25Q9UHP3 1055 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 USP20Q9Y2K6 914 aa14.57□□□□□ -0.08
GTF3A-209ENST00000640289 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 ABHD14A-ACY1A0A1B0GW23 586 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 FRMD3A2A2Y4 597 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 B4GALT5O43286 388 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TRAK2O60296 914 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TSPAN1O60635 241 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 BAIAP3O94812 1187 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 NMT1P30419 496 aaKnown RBP14.56□□□□□ -0.08
GTF3A-209ENST00000640289 NCKAP1LP55160 1127 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
GTF3A-209ENST00000640289 DEFB103AP81534 67 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 DSC3Q14574 896 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TAS1R3Q7RTX0 852 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TDHQ8IZJ6 230 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TMEM161BQ8NDZ6 487 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 SPIRE2Q8WWL2 714 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 ADAM2Q99965 735 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 NTPCRQ9BSD7 190 aaKnown RBP14.56□□□□□ -0.08
GTF3A-209ENST00000640289 PANK4Q9NVE7 773 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 TBC1D7Q9P0N9 293 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
GTF3A-209ENST00000640289 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
GTF3A-209ENST00000640289 DENND3A2RUS2 1198 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 K7ENM7 598 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 ENPP3O14638 875 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 ERLIN2O94905 339 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 PRKCBP05771 671 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 IBSPP21815 317 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 HOXA11P31270 313 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 SMTNP53814 917 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 COASYQ13057 564 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 TMCO2Q7Z6W1 182 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 CDR2LQ86X02 465 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 TET1Q8NFU7 2136 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 HPS3Q969F9 1004 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 FTHL17Q9BXU8 183 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 FGFBP2Q9BYJ0 223 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 FZD8Q9H461 694 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
GTF3A-209ENST00000640289 PRMT7Q9NVM4 692 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-209ENST00000640289 K7ERI5 159 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 KLRC4O43908 158 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 MAPTP10636 758 aaKnown RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 ZSCAN20P17040 1043 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 GAP43P17677 238 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 ARF4P18085 180 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 KCNJ6P48051 423 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 EFNA5P52803 228 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 MAPK6Q16659 721 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 FAM187BQ17R55 369 aa14.54□□□□□ -0.08
GTF3A-209ENST00000640289 ZC2HC1CQ53FD0 456 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 FAM109BQ6ICB4 259 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-209ENST00000640289 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms