RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CEP164Q9UPV0 1460 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 KRIT1O00522 736 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HGSO14964 777 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 KMOO15229 486 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SPTLC1O15269 473 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 KRT86O43790 486 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 DGKIO75912 1065 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 UBTFL6P0CB48 400 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HSMCR30P0CW71 290 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 GSTT1P30711 240 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ARHGDIBP52566 201 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CYP4F2P78329 520 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 CYP4F3Q08477 520 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HSPA14Q0VDF9 509 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 BFSP1Q12934 665 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PDE3AQ14432 1141 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NFE2Q16621 373 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 AARS2Q5JTZ9 985 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 C6orf163Q5TEZ5 329 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 TBC1D9BQ66K14 1250 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PDPK2PQ6A1A2 396 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SULF1Q8IWU6 871 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 PDZD8Q8NEN9 1154 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 NELFBQ8WX92 580 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 METTL2AQ96IZ6 378 aaKnown RBP4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ANAPC5Q9UJX4 755 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 ADAMTS8Q9UP79 889 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 HPS5Q9UPZ3 1129 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 SPEF1Q9Y4P9 236 aa4.6□□□□□ -1.67
SCN3A-209ENST00000639244 H3BQV1 296 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SLC7A4O43246 635 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 P4HBP07237 508 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ITGAXP20702 1163 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 DNAJB1P25685 340 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 LACTBP83111 547 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TTBK2Q6IQ55 1244 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PATL1Q86TB9 770 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 C10orf88Q9H8K7 445 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ABCB6Q9NP58 842 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 NOB1Q9ULX3 412 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ATMINO43313 823 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SIN3BO75182 1162 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PDE5AO76074 875 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 HEXBP07686 556 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ACTN1P12814 892 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PHKA1P46020 1223 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 STAT2P52630 851 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 APOBRQ0VD83 1088 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 E2F2Q14209 437 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 GGT6Q6P531 493 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 AGR3Q8TD06 166 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ARL8AQ96BM9 186 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 CRBNQ96SW2 442 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TRIM55Q9BYV6 548 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TGIF2Q9GZN2 237 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 NT5C3AQ9H0P0 336 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 STN1Q9H668 368 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 CYTH4Q9UIA0 394 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 DHX57Q6P158 1386 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 RAB3GAP2Q9H2M9 1393 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 C17orf113A0A1B0GUU1 675 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 MTSS1O43312 755 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SSBP05455 408 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 CCDC192P0DO97 292 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PTK2BQ14289 1009 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PABPC1LQ4VXU2 614 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 FAM209AQ5JX71 171 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ZNF658Q5TYW1 1059 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 LRGUKQ96M69 825 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PPP1R10Q96QC0 940 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TRIM15Q9C019 465 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 GNRH1P01148 92 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 HOXB1P14653 301 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 M6PRP20645 277 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 NOS3P29474 1203 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SPDYAQ5MJ70 313 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 LEO1Q8WVC0 666 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 RNF34Q969K3 372 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SECISBP2Q96T21 854 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TMEM206Q9H813 350 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ATP8A2Q9NTI2 1148 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 POLR3BQ9NW08 1133 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 TTC41PQ6P2S7 1318 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 OXSR1O95747 527 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 SCNN1DP51172 638 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 OTUD4Q01804 1114 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 PLCB3Q01970 1234 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 LGALS3BPQ08380 585 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 KLHL38Q2WGJ6 581 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 CASC4Q6P4E1 433 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 ZNF467Q7Z7K2 595 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 CLVS1Q8IUQ0 354 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 C7orf61Q8IZ16 206 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 KIRREL3Q8IZU9 778 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 REXO1Q8N1G1 1221 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 FAM133AQ8N9E0 248 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 STKLD1Q8NE28 680 aa4.59□□□□□ -1.67
SCN3A-209ENST00000639244 HDAC2Q92769 488 aaKnown RBP4.59□□□□□ -1.67
SCN3A-209ENST00000639244 MROH8Q9H579 483 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms