RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	PLEKHG4B	Q96PX9	1271 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	CCDC28B	Q9BUN5	200 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	VCX3B	Q9H321	246 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	TLE6	Q9H808	572 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	VCX3A	Q9NNX9	186 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	ATXN10	Q9UBB4	475 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	PCYOX1	Q9UHG3	505 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	SYNGAP1	Q96PV0	1343 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	TTLL1	O95922	423 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	COASY	Q13057	564 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	LCA5	Q86VQ0	697 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	SYNE4	Q8N205	404 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	GLIS3	Q8NEA6	775 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	RFFL	Q8WZ73	363 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	CDK5RAP3	Q96JB5	506 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	GBP5	Q96PP8	586 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	RIOK1	Q9BRS2	568 aa	Known RBP	11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	TBC1D10A	Q9BXI6	508 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	TAOK3	Q9H2K8	898 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	TMCO1	Q9UM00	188 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	PCDHA3	Q9Y5H8	950 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	USH1C	Q9Y6N9	552 aa		11.94	□□□□□ -0.5
STRADA-231	ENST00000638708	ADGRA3	Q8IWK6	1321 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708		H0Y3Z8	333 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	NMT2	O60551	498 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	CCNT1	O60563	726 aa	Known RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	ATP9A	O75110	1047 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	DCTN3	O75935	186 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	TJP3	O95049	919 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	KRT13	P13646	458 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	UCHL3	P15374	230 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	TARS	P26639	723 aa	Known RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	COPB2	P35606	906 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	RNASEL	Q05823	741 aa	Known RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	PPAT	Q06203	517 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	PRPF4B	Q13523	1007 aa	Known RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	RRP1B	Q14684	758 aa	Known RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	NONO	Q15233	471 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	GSTA3	Q16772	222 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	DPY19L2	Q6NUT2	758 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	ARHGEF18	Q6ZSZ5	1173 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	OTUD6A	Q7L8S5	288 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	DNAAF5	Q86Y56	855 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	HELB	Q8NG08	1087 aa	Predicted RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	MIPOL1	Q8TD10	442 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	ART4	Q93070	314 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	BARHL2	Q9NY43	387 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	HAO1	Q9UJM8	370 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	CHKB	Q9Y259	395 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	STARD13	Q9Y3M8	1113 aa		11.93	□□□□□ -0.5
STRADA-231	ENST00000638708	DDX3X	O00571	662 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	IRS4	O14654	1257 aa	Predicted RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	MAPK13	O15264	365 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	CREB1	P16220	341 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	VCAM1	P19320	739 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	TAC1	P20366	129 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	EPHB2	P29323	1055 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	SH3BGR	P55822	239 aa	Predicted RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GRM4	Q14833	912 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	MYBPC3	Q14896	1274 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	LONRF1	Q17RB8	773 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	LETM2	Q2VYF4	491 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	FAM26F	Q5R3K3	315 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	PPP1R21	Q6ZMI0	780 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	CYFIP1	Q7L576	1253 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	NEK8	Q86SG6	692 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	NLRP10	Q86W26	655 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	DDX12P	Q92771	950 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	NDN	Q99608	321 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	KIAA1683	Q9H0B3	1180 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	KCNK9	Q9NPC2	374 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	PRDM11	Q9NQV5	511 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	HGS	O14964	777 aa	Predicted RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	PDE8A	O60658	829 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	HNRNPCL1	O60812	293 aa	Known RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GGPS1	O95749	300 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GH1	P01241	217 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	TMEM253	P0C7T8	217 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	ACTN1	P12814	892 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	BRAF	P15056	766 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GSTT1	P30711	240 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	SERPINB4	P48594	390 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	FXR2	P51116	673 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GALC	P54803	685 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	JAM2	P57087	298 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	KCNH2	Q12809	1159 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	TMEM119	Q4V9L6	283 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	HEATR3	Q7Z4Q2	680 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	ADAT2	Q7Z6V5	191 aa	Known RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	RBM46	Q8TBY0	533 aa	Known RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	U2AF1L4	Q8WU68	220 aa	Known RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	GATA6	Q92908	595 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	C18orf8	Q96DM3	657 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	LRRC37B	Q96QE4	947 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	CRAMP1	Q96RY5	1269 aa		11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	METTL14	Q9HCE5	456 aa	Known RBP	11.92	□□□□□ -0.5
STRADA-231	ENST00000638708	MLXIPL	Q9NP71	852 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms