RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 PTPN14Q15678 1187 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 REXO1L1PQ8IX06 675 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 EMID1Q96A84 441 aaPredicted RBP23.71■■□□□ 1.39
SCARB2-212ENST00000638663 SUGCTQ9HAC7 445 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 ZNHIT6Q9NWK9 470 aaKnown RBP23.71■■□□□ 1.39
SCARB2-212ENST00000638663 MEA1Q16626 185 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 DUSP28Q4G0W2 176 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 SLC39A4Q6P5W5 647 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 CACNA2D4Q7Z3S7 1137 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 MSL3Q8N5Y2 521 aaKnown RBP23.71■■□□□ 1.39
SCARB2-212ENST00000638663 DEPTORQ8TB45 409 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 TRAPPC12Q8WVT3 735 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 ERAP1Q9NZ08 941 aa23.71■■□□□ 1.39
SCARB2-212ENST00000638663 TRIM49P0CI25 452 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 TRIM49CP0CI26 452 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 BFSP1Q12934 665 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 EXOC3L4Q17RC7 722 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 RRAGAQ7L523 313 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 BAP1Q92560 729 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 BICD1Q96G01 975 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 RNPEPQ9H4A4 650 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 NLRC4Q9NPP4 1024 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 FLRT1Q9NZU1 646 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 ADGRG1Q9Y653 693 aa23.7■■□□□ 1.38
SCARB2-212ENST00000638663 GOLGA8IPA6NC78 632 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 GOLGA8JA6NMD2 632 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 HNRNPDLO14979 420 aaKnown RBP23.69■■□□□ 1.38
SCARB2-212ENST00000638663 HBP1O60381 514 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 KRT13P13646 458 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 SLC9A1P19634 815 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 POLR2FP61218 127 aaKnown RBP23.69■■□□□ 1.38
SCARB2-212ENST00000638663 PRAMEF19Q5SWL8 479 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 LRRC71Q8N4P6 559 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 EDEM3Q9BZQ6 932 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 CEP72Q9P209 647 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 LRRC53A6NM62 1247 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 ZNF286BP0CG31 522 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 ACTN1P12814 892 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 CYP2B6P20813 491 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 ABCD1P33897 745 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 TM4SF4P48230 202 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 CAPSQ13938 189 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 IQSEC1Q6DN90 963 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 GBP6Q6ZN66 633 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 PRPF31Q8WWY3 499 aaKnown RBP23.69■■□□□ 1.38
SCARB2-212ENST00000638663 SAAL1Q96ER3 474 aa23.69■■□□□ 1.38
SCARB2-212ENST00000638663 R3HCC1Q9Y3T6 440 aaKnown RBP23.69■■□□□ 1.38
SCARB2-212ENST00000638663 ADCY6O43306 1168 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 HOXC6P09630 235 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 CCDC175P0C221 793 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 PON1P27169 355 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 FMO5P49326 533 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 STRN3Q13033 797 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 MKRN4PQ13434 485 aaPredicted RBP23.68■■□□□ 1.38
SCARB2-212ENST00000638663 CCL14Q16627 93 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 BRDTQ58F21 947 aaPredicted RBP23.68■■□□□ 1.38
SCARB2-212ENST00000638663 IER5Q5VY09 327 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 CYP4F22Q6NT55 531 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 PDXDC1Q6P996 788 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 INTS8Q75QN2 995 aaKnown RBP23.68■■□□□ 1.38
SCARB2-212ENST00000638663 OR6J1Q8NGC5 347 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 USP6NLQ92738 828 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 PLAGL2Q9UPG8 496 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 USP20Q9Y2K6 914 aa23.68■■□□□ 1.38
SCARB2-212ENST00000638663 IGKV6-21A0A0C4DH24 114 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 GPIHBP1Q8IV16 184 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 EXOC8Q8IYI6 725 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 ACRBPQ8NEB7 543 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 TCP11Q8WWU5 503 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 POMGNT1Q8WZA1 660 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 GANQ9H2C0 597 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 GCNT4Q9P109 453 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 K7ERI5 159 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 TNPO2O14787 897 aaKnown RBP23.67■■□□□ 1.38
SCARB2-212ENST00000638663 GAS2O43903 313 aaKnown RBP23.67■■□□□ 1.38
SCARB2-212ENST00000638663 HNRNPH3P31942 346 aaKnown RBP23.67■■□□□ 1.38
SCARB2-212ENST00000638663 DLG4P78352 724 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 TNFAIP2Q03169 654 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 DPY19L2P1Q6NXN4 242 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 CBWD2Q8IUF1 395 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 ZBTB10Q96DT7 871 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 HHIPL1Q96JK4 782 aa23.67■■□□□ 1.38
SCARB2-212ENST00000638663 GTPBP10A4D1E9 387 aaKnown RBP23.66■■□□□ 1.38
SCARB2-212ENST00000638663 PPFIA4O75335 1185 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 ADRB2P07550 413 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 LIG4P49917 911 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 VAMP7P51809 220 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 IGBP1P78318 339 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 CBWD6Q4V339 395 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 CBWD3Q5JTY5 395 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 CBWD5Q5RIA9 395 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 PSPC1Q8WXF1 523 aaKnown RBP23.66■■□□□ 1.38
SCARB2-212ENST00000638663 PLCB1Q9NQ66 1216 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 GJD2Q9UKL4 321 aa23.66■■□□□ 1.38
SCARB2-212ENST00000638663 EPN1Q9Y6I3 576 aaPredicted RBP23.66■■□□□ 1.38
SCARB2-212ENST00000638663 MAPK13O15264 365 aa23.65■■□□□ 1.38
SCARB2-212ENST00000638663 CA12O43570 354 aa23.65■■□□□ 1.38
SCARB2-212ENST00000638663 INSRRP14616 1297 aa23.65■■□□□ 1.38
SCARB2-212ENST00000638663 SCP2P22307 547 aa23.65■■□□□ 1.38
SCARB2-212ENST00000638663 CYP2C19P33261 490 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms