RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TAL1P17542 331 aaPredicted RBP21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 VCAM1P19320 739 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 MAPK7Q13164 816 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 BYSLQ13895 437 aaKnown RBP21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 MYBPC2Q14324 1141 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 KIAA1755Q5JYT7 1200 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 C11orf63Q6NUN7 778 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 RPAINQ86UA6 219 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 JAMLQ86YT9 394 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 KSR1Q8IVT5 923 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 NEK9Q8TD19 979 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 VTI1AQ96AJ9 217 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 TAS2R14Q9NYV8 317 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 COG5Q9UP83 839 aa21.75■■□□□ 1.07
SYNGAP1-227ENST00000638142 CHMP2AO43633 222 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 RASSF9O75901 435 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 BCRP11274 1271 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 GBP1P32455 592 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 TCEAL1Q15170 157 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 ODR4Q5SWX8 454 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 ALG3Q92685 438 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 P3H4Q92791 437 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 AGPAT1Q99943 283 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 NRXN2Q9P2S2 1712 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 GOLGA6L7A0A1B0GV03 622 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 MAP2K2P36507 400 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 ARHGAP44Q17R89 818 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 KCTD19Q17RG1 926 aaPredicted RBP21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 GKAP1Q5VSY0 366 aaPredicted RBP21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 PGM2Q96G03 612 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 EPB41L4BQ9H329 900 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 PRR12Q9ULL5 1215 aa21.74■■□□□ 1.07
SYNGAP1-227ENST00000638142 CHUKO15111 745 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 PMS2P54278 862 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 ZNF211Q13398 564 aaPredicted RBP21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 PHLDB3Q6NSJ2 640 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 ADAT2Q7Z6V5 191 aaKnown RBP21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 PALB2Q86YC2 1186 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 UBL4BQ8N7F7 174 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 GLG1Q92896 1179 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 SYNPO2Q9UMS6 1093 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 ALG6Q9Y672 507 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 FOXN3O00409 490 aaPredicted RBP21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 ZBTB39O15060 712 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 KIAA0391O15091 583 aaKnown RBP21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 EXOC3O60645 756 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 PHF2O75151 1096 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 NPR1P16066 1061 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 CHRNA3P32297 505 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 ERMARDQ5T6L9 678 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 DENND2CQ68D51 928 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 KIAA0825Q8IV33 1275 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 LMO3Q8TAP4 145 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 OSBPL7Q9BZF2 842 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 KLC4Q9NSK0 619 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 PCDHAC2Q9Y5I4 1007 aa21.73■■□□□ 1.07
SYNGAP1-227ENST00000638142 CCDC169A6NNP5 214 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 GAS7O60861 476 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 CAND2O75155 1236 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 CPLX4Q7Z7G2 160 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 XPO6Q96QU8 1125 aaKnown RBP21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 WDR11Q9BZH6 1224 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 LRRC4CQ9HCJ2 640 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 COPB2P35606 906 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 FKBP1AP62942 108 aaKnown RBP21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 ZDHHC24Q6UX98 284 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 CROCCP2Q86T23 111 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 CHMP6Q96FZ7 201 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 CCDC114Q96M63 670 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 TACO1Q9BSH4 297 aaKnown RBP21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 STRA6Q9BX79 667 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 FAM129AQ9BZQ8 928 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 GOPCQ9HD26 462 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 TMOD4Q9NZQ9 345 aa21.72■■□□□ 1.07
SYNGAP1-227ENST00000638142 RBBP6Q7Z6E9 1792 aaKnown RBP21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 LRRN2O75325 713 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 GGPS1O95749 300 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 KRT13P13646 458 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 DRD4P21917 467 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PLTPP55058 493 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PPARDQ03181 441 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 RBM26Q5T8P6 1007 aaKnown RBP21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 SYCP3Q8IZU3 236 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 TMX4Q9H1E5 349 aaPredicted RBP21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 CTTNBP2NLQ9P2B4 639 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PARP2Q9UGN5 583 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PCYOX1Q9UHG3 505 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PODXLO00592 558 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 GH2P01242 217 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 ALDH1B1P30837 517 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 PTGIRP43119 386 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 CETN1Q12798 172 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 LACTB2Q53H82 288 aaPredicted RBP21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 ANKRD20A8PQ5CZ79 823 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms