RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 PTENP60484 403 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 PPP2R5AQ15172 486 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 DEPTORQ8TB45 409 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 AK8Q96MA6 479 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 RC3H2Q9HBD1 1191 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 FAM105AQ9NUU6 356 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 INPP5FQ9Y2H2 1132 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 PCDHB12Q9Y5F1 795 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 CLIC4Q9Y696 253 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 EYSQ5T1H1 3165 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 A0A0U1RQF3 1178 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 EYA4O95677 639 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 MARCKSP29966 332 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 BMPR1AP36894 532 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 FOXD4L6Q3SYB3 417 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 NOTUMQ6P988 496 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 FOXD4L3Q6VB84 417 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 HELQQ8TDG4 1101 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 KIFAP3Q92845 792 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 LPPQ93052 612 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 PGBD4Q96DM1 585 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 CPB2Q96IY4 423 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 TMEM117Q9H0C3 514 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 C2orf40Q9H1Z8 148 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 POLD4Q9HCU8 107 aa15.95■□□□□ 0.14
CACNA1A-249ENST00000637777 MYH15Q9Y2K3 1946 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 H3BNC9 293 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 EOMESO95936 686 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 RB1P06400 928 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 TXLNAP40222 546 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 FAM189BP81408 668 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 RNASELQ05823 741 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 MBTD1Q05BQ5 628 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 RAD51AP2Q09MP3 1159 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 DHX8Q14562 1220 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 STK38Q15208 465 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 PCBP1Q15365 356 aaKnown RBP eCLIP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 GLB1LQ6UWU2 654 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 THNSL1Q8IYQ7 743 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 CLP1Q92989 425 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 MMTAG2Q9BU76 263 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 TYW1Q9NV66 732 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 PCDHB2Q9Y5E7 798 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 MYH11P35749 1972 aa15.94■□□□□ 0.14
CACNA1A-249ENST00000637777 CCDC169A6NNP5 214 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 TSPAN1O60635 241 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 LPXNO60711 386 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 KRT18P05783 430 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 AXLP30530 894 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 TIGD5Q53EQ6 642 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 EP400NLQ6ZTU2 488 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 HACE1Q8IYU2 909 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 CRIPAKQ8N1N5 446 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 URGCPQ8TCY9 931 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 MRPL38Q96DV4 380 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 ZNF396Q96N95 335 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 RUSC1Q9BVN2 902 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 PLVAPQ9BX97 442 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 MRPL9Q9BYD2 267 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 ALG13Q9NP73 1137 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 PRMT7Q9NVM4 692 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 THEGQ9P2T0 379 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 HCSTQ9UBK5 93 aa15.93■□□□□ 0.14
CACNA1A-249ENST00000637777 HIP1RO75146 1068 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 PRKCBP05771 671 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 LAG3P18627 525 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 NAMPTP43490 491 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 PEX3P56589 373 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 GRIN1Q05586 938 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 POU5F1BQ06416 359 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 DMP1Q13316 513 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 MAPK6Q16659 721 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 CLLU1OSQ5K130 101 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 SPECC1Q5M775 1068 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 KCNK18Q7Z418 384 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 CDR2LQ86X02 465 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 KLHL23Q8NBE8 558 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 BSNDQ8WZ55 320 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 CCDC51Q96ER9 411 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 CASD1Q96PB1 797 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 PNMA5Q96PV4 448 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 USP28Q96RU2 1077 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 KIFC3Q9BVG8 833 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 NFKBIZQ9BYH8 718 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 GBP3Q9H0R5 595 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 PRDM6Q9NQX0 595 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 LMCD1Q9NZU5 365 aa15.92■□□□□ 0.14
CACNA1A-249ENST00000637777 TRANK1O15050 2925 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 GRM6O15303 877 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 B4GALT5O43286 388 aa15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 ZC3H11AO75152 810 aaKnown RBP eCLIP15.91■□□□□ 0.14
CACNA1A-249ENST00000637777 NPTXRO95502 500 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms