RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
CIITA-215ENST00000637439 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 EXOC8Q8IYI6 725 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 ETNPPLQ8TBG4 499 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 PGBD4Q96DM1 585 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 IGSF21Q96ID5 467 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 PHOX2BQ99453 314 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 FAM105AQ9NUU6 356 aa20.05■□□□□ 0.8
CIITA-215ENST00000637439 TMEM150BA6NC51 233 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 C2CD4DB7Z1M9 353 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 M0R2N6 131 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 EPB41L2O43491 1005 aaKnown RBP20.04■□□□□ 0.8
CIITA-215ENST00000637439 NONOQ15233 471 aaKnown RBP eCLIP20.04■□□□□ 0.8
CIITA-215ENST00000637439 ATAT1Q5SQI0 421 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 KIAA1841Q6NSI8 718 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 PPFIBP1Q86W92 1011 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 PLCD3Q8N3E9 789 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 ZNF274Q96GC6 653 aaPredicted RBP20.04■□□□□ 0.8
CIITA-215ENST00000637439 TBC1D13Q9NVG8 400 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
CIITA-215ENST00000637439 PPME1Q9Y570 386 aa20.04■□□□□ 0.8
CIITA-215ENST00000637439 ST18O60284 1047 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 GALTP07902 379 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
CIITA-215ENST00000637439 RARS2Q5T160 578 aaKnown RBP20.03■□□□□ 0.8
CIITA-215ENST00000637439 ANO5Q75V66 913 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 KRT25Q7Z3Z0 450 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 ZDHHC14Q8IZN3 488 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 TDRD5Q8NAT2 981 aaKnown RBP20.03■□□□□ 0.8
CIITA-215ENST00000637439 URGCPQ8TCY9 931 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 SLC7A3Q8WY07 619 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 LPPQ93052 612 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 NLRP4Q96MN2 994 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 SH2D3AQ9BRG2 576 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 NRDE2Q9H7Z3 1164 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 ZSWIM6Q9HCJ5 1215 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 CYP26B1Q9NR63 512 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 CDH22Q9UJ99 828 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 USTQ9Y2C2 406 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 INPP5FQ9Y2H2 1132 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
CIITA-215ENST00000637439 OFD1O75665 1012 aa20.02■□□□□ 0.8
CIITA-215ENST00000637439 QARSP47897 775 aaKnown RBP20.02■□□□□ 0.8
CIITA-215ENST00000637439 TMEM173Q86WV6 379 aaPredicted RBP20.02■□□□□ 0.8
CIITA-215ENST00000637439 FAM20AQ96MK3 541 aa20.02■□□□□ 0.8
CIITA-215ENST00000637439 DBR1Q9UK59 544 aaKnown RBP20.02■□□□□ 0.8
CIITA-215ENST00000637439 COL4A3BPQ9Y5P4 624 aa20.02■□□□□ 0.8
CIITA-215ENST00000637439 PPP2R5CQ13362 524 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 LONRF3Q496Y0 759 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 CABP7Q86V35 215 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 KSR1Q8IVT5 923 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 SLC22A17Q8WUG5 538 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 AUTS2Q8WXX7 1259 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 ATOH1Q92858 354 aaPredicted RBP20.01■□□□□ 0.79
CIITA-215ENST00000637439 SLKQ9H2G2 1235 aaPredicted RBP20.01■□□□□ 0.79
CIITA-215ENST00000637439 IFT122Q9HBG6 1241 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 KANSL3Q9P2N6 904 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 PCDHB2Q9Y5E7 798 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 CNTNAP2Q9UHC6 1331 aa20.01■□□□□ 0.79
CIITA-215ENST00000637439 USP34Q70CQ2 3546 aa20■□□□□ 0.79
CIITA-215ENST00000637439 BRD1O95696 1058 aa20■□□□□ 0.79
CIITA-215ENST00000637439 PDGFBP01127 241 aaPredicted RBP20■□□□□ 0.79
CIITA-215ENST00000637439 P4HBP07237 508 aaKnown RBP20■□□□□ 0.79
CIITA-215ENST00000637439 GCFC2P16383 781 aaKnown RBP20■□□□□ 0.79
CIITA-215ENST00000637439 EPCAMP16422 314 aa20■□□□□ 0.79
CIITA-215ENST00000637439 RFC5P40937 340 aa20■□□□□ 0.79
CIITA-215ENST00000637439 NPY5RQ15761 445 aa20■□□□□ 0.79
CIITA-215ENST00000637439 INF2Q27J81 1249 aa20■□□□□ 0.79
CIITA-215ENST00000637439 LETM2Q2VYF4 491 aa20■□□□□ 0.79
CIITA-215ENST00000637439 PLA2G4FQ68DD2 849 aa20■□□□□ 0.79
CIITA-215ENST00000637439 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
CIITA-215ENST00000637439 MRPL10Q7Z7H8 261 aaKnown RBP20■□□□□ 0.79
CIITA-215ENST00000637439 C12orf76Q8N812 135 aaPredicted RBP20■□□□□ 0.79
CIITA-215ENST00000637439 PSPC1Q8WXF1 523 aaKnown RBP20■□□□□ 0.79
CIITA-215ENST00000637439 EMILIN2Q9BXX0 1053 aa20■□□□□ 0.79
CIITA-215ENST00000637439 TM6SF1Q9BZW5 370 aa20■□□□□ 0.79
CIITA-215ENST00000637439 GBP3Q9H0R5 595 aa20■□□□□ 0.79
CIITA-215ENST00000637439 SFXN1Q9H9B4 322 aa20■□□□□ 0.79
CIITA-215ENST00000637439 DNAJB4Q9UDY4 337 aa20■□□□□ 0.79
CIITA-215ENST00000637439 MYO10Q9HD67 2058 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 CCDC194A0A1B0GVG4 234 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 MEIS3P2A8K0S8 358 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 GALR2O43603 387 aaPredicted RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 GAS2O43903 313 aaKnown RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 WEE2P0C1S8 567 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 SLC11A1P49279 550 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 PTPN14Q15678 1187 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 BCL7CQ8WUZ0 217 aaPredicted RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 TCP11Q8WWU5 503 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 PRPF31Q8WWY3 499 aaKnown RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 ACSF2Q96CM8 615 aaPredicted RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 CEP170P1Q96L14 293 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 FAM193BQ96PV7 902 aaPredicted RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 NAP1L4Q99733 375 aaKnown RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 TMEM175Q9BSA9 504 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 DHX33Q9H6R0 707 aaKnown RBP19.99■□□□□ 0.79
CIITA-215ENST00000637439 RSAD1Q9HA92 442 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 KCNMB3Q9NPA1 279 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms