RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NAMPTP43490 491 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 GIT2Q14161 759 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 PPP2R5AQ15172 486 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 TJAP1Q5JTD0 557 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 SRGAP1Q7Z6B7 1085 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 DEPTORQ8TB45 409 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 DDX12PQ92771 950 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 PYM1Q9BRP8 204 aaKnown RBP19.01■□□□□ 0.63
CLN6-218ENST00000637223 INO80BQ9C086 356 aaPredicted RBP19.01■□□□□ 0.63
CLN6-218ENST00000637223 TMX1Q9H3N1 280 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 ZHX3Q9H4I2 956 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 ODF2LQ9ULJ1 636 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 SIP14410 1827 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 EVPLQ92817 2033 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 PRUNE2Q8WUY3 3088 aa19.01■□□□□ 0.63
CLN6-218ENST00000637223 CCDC169A6NNP5 214 aa19■□□□□ 0.63
CLN6-218ENST00000637223 INO80B-WBP1J3KQ70 363 aa19■□□□□ 0.63
CLN6-218ENST00000637223 ACTN4O43707 911 aaKnown RBP19■□□□□ 0.63
CLN6-218ENST00000637223 GADD45BO75293 160 aaPredicted RBP19■□□□□ 0.63
CLN6-218ENST00000637223 TBCAO75347 108 aaKnown RBP19■□□□□ 0.63
CLN6-218ENST00000637223 BAIAP3O94812 1187 aa19■□□□□ 0.63
CLN6-218ENST00000637223 FAM13AO94988 1023 aa19■□□□□ 0.63
CLN6-218ENST00000637223 NPTX2P47972 431 aa19■□□□□ 0.63
CLN6-218ENST00000637223 POU5F1BQ06416 359 aa19■□□□□ 0.63
CLN6-218ENST00000637223 DMP1Q13316 513 aaPredicted RBP19■□□□□ 0.63
CLN6-218ENST00000637223 ODR4Q5SWX8 454 aa19■□□□□ 0.63
CLN6-218ENST00000637223 CATSPER4Q7RTX7 472 aa19■□□□□ 0.63
CLN6-218ENST00000637223 CEP57L1Q8IYX8 460 aa19■□□□□ 0.63
CLN6-218ENST00000637223 TMEM87AQ8NBN3 555 aa19■□□□□ 0.63
CLN6-218ENST00000637223 MTIF3Q9H2K0 278 aaKnown RBP19■□□□□ 0.63
CLN6-218ENST00000637223 TNMDQ9H2S6 317 aa19■□□□□ 0.63
CLN6-218ENST00000637223 KBTBD4Q9NVX7 518 aa19■□□□□ 0.63
CLN6-218ENST00000637223 ADGRA3Q8IWK6 1321 aa19■□□□□ 0.63
CLN6-218ENST00000637223 ABHD14A-ACY1A0A1B0GW23 586 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 MGEA5O60502 916 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 PLS3P13797 630 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 LIG1P18858 919 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 AFMP43652 599 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 KCNJ6P48051 423 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 WDR5P61964 334 aaKnown RBP18.99■□□□□ 0.63
CLN6-218ENST00000637223 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 LONRF3Q496Y0 759 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 RASIP1Q5U651 963 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 CDCA2Q69YH5 1023 aaPredicted RBP18.99■□□□□ 0.63
CLN6-218ENST00000637223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLN6-218ENST00000637223 IFNLR1Q8IU57 520 aaPredicted RBP18.99■□□□□ 0.63
CLN6-218ENST00000637223 ZBTB8OSQ8IWT0 167 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 GRAMD1CQ8IYS0 662 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 MYCT1Q8N699 235 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 LINC01599Q8WXQ3 324 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 NFKBIZQ9BYH8 718 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 C2orf40Q9H1Z8 148 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 MAGEF1Q9HAY2 307 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
CLN6-218ENST00000637223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.98■□□□□ 0.63
CLN6-218ENST00000637223 SLFN14P0C7P3 912 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 IBSPP21815 317 aaPredicted RBP18.98■□□□□ 0.63
CLN6-218ENST00000637223 DEFB103AP81534 67 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 DNAJC19Q96DA6 116 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 FTHL17Q9BXU8 183 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 LRRC27Q9C0I9 530 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 C17orf75Q9HAS0 396 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 PARVGQ9HBI0 331 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 PIN4Q9Y237 131 aaKnown RBP18.98■□□□□ 0.63
CLN6-218ENST00000637223 SLC4A7Q9Y6M7 1214 aa18.98■□□□□ 0.63
CLN6-218ENST00000637223 DENND3A2RUS2 1198 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 ENPP3O14638 875 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 SLC16A4O15374 487 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 EFCAB14O75071 495 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 PRPF40AO75400 957 aaKnown RBP18.97■□□□□ 0.63
CLN6-218ENST00000637223 ERLIN2O94905 339 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 ZNF202O95125 648 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 IDEP14735 1019 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 CASP1P29466 404 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 ZNF131P52739 623 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 AMPD3Q01432 767 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 TMCO2Q7Z6W1 182 aaPredicted RBP18.97■□□□□ 0.63
CLN6-218ENST00000637223 RTN4RL1Q86UN2 441 aaPredicted RBP18.97■□□□□ 0.63
CLN6-218ENST00000637223 PAGE5Q96GU1 130 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 ADAM2Q99965 735 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 TRIM9Q9C026 710 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 BLZF1Q9H2G9 400 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 LARSQ9P2J5 1176 aaKnown RBP18.97■□□□□ 0.63
CLN6-218ENST00000637223 USP25Q9UHP3 1055 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 TCHHQ07283 1943 aa18.97■□□□□ 0.63
CLN6-218ENST00000637223 LOXHD1Q8IVV2 1947 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 B4GALT5O43286 388 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 TSPAN1O60635 241 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 ZSCAN20P17040 1043 aaPredicted RBP18.96■□□□□ 0.63
CLN6-218ENST00000637223 SMTNP53814 917 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 ASIC1P78348 528 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 DSC3Q14574 896 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 AMHR2Q16671 573 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 CLEC17AQ6ZS10 378 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 SFR1Q86XK3 245 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 MYOCDQ8IZQ8 938 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 CNNM3Q8NE01 707 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 SPIRE2Q8WWL2 714 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 C7orf25Q9BPX7 421 aa18.96■□□□□ 0.63
CLN6-218ENST00000637223 CCDC113Q9H0I3 377 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms