RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 AJAP1Q9UKB5 411 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 MYH11P35749 1972 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 EMSYQ7Z589 1322 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 LTBP3Q9NS15 1303 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 ANKRD62A6NC57 917 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 ERICH4A6NGS2 130 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 H0YCG3 227 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 HSF2BPO75031 334 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 MYBL2P10244 700 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 DNA2P51530 1060 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 PEX3P56589 373 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 MCCD1P59942 119 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 SLC7A5Q01650 507 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 SPP2Q13103 211 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 VSIG10LQ86VR7 867 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 LNX1Q8TBB1 728 aaPredicted RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.35e-8■■■■□ 21.4
CLN8-212ENST00000637083 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 IKZF4Q9H2S9 585 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 EHD2Q9NZN4 543 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
CLN8-212ENST00000637083 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 TMEM59LQ9UK28 342 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
CLN8-212ENST00000637083 CEP104O60308 925 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 SYF2O95926 243 aaKnown RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 ENPEPQ07075 957 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 ARHGAP44Q17R89 818 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 SPIRE2Q8WWL2 714 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 KRT12Q99456 494 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 NAP1L3Q99457 506 aaPredicted RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 AGPAT1Q99943 283 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 UBE2TQ9NPD8 197 aaPredicted RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 PACSIN2Q9UNF0 486 aaPredicted RBP13.14□□□□□ -0.31
CLN8-212ENST00000637083 FER1L6Q2WGJ9 1857 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 PFASO15067 1338 aa13.14□□□□□ -0.31
CLN8-212ENST00000637083 BACH1O14867 736 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 PSAPP07602 524 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 NR3C2P08235 984 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 SCP2P22307 547 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 DSG3P32926 999 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 PPFIA1Q13136 1202 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
CLN8-212ENST00000637083 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 GSPT2Q8IYD1 628 aaKnown RBP13.13□□□□□ -0.31
CLN8-212ENST00000637083 RASGEF1CQ8N431 466 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 LMO3Q8TAP4 145 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 ATG4CQ96DT6 458 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 EPB41L5Q9HCM4 733 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 NFASCO94856 1347 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 FZD9O00144 591 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 SLC16A4O15374 487 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 PHACTR2O75167 634 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 GGCXP38435 758 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 MXI1P50539 228 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 GUCY2DQ02846 1103 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 CUL1Q13616 776 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 MCPH1Q8NEM0 835 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 CCDC26Q8TAB7 109 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 FAM81BQ96LP2 452 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms