RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZNF862O60290 1169 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 SSTR3P32745 418 aaPredicted RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 PRKCIP41743 596 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 FKBP1CQ5VVH2 108 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 PCNX4Q63HM2 1172 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 SNRNP48Q6IEG0 339 aaKnown RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 DNAH12Q6ZR08 3092 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 SEMA4DQ92854 862 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 PI4K2AQ9BTU6 479 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 STK33Q9BYT3 514 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 KIAA1683Q9H0B3 1180 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 VAMP7P51809 220 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 DHX38Q92620 1227 aaKnown RBP20.5■□□□□ 0.87
CLN5-216ENST00000636780 AMACRQ9UHK6 382 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 STK24Q9Y6E0 443 aa20.5■□□□□ 0.87
CLN5-216ENST00000636780 RGS20O76081 388 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 SGPL1O95470 568 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 ZSCAN26Q16670 478 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 C2CD6Q53TS8 623 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 SCARA3Q6AZY7 606 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 ZNF572Q7Z3I7 529 aaPredicted RBP20.49■□□□□ 0.87
CLN5-216ENST00000636780 SLC30A5Q8TAD4 765 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 GABBR1Q9UBS5 961 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 RBBP6Q7Z6E9 1792 aaKnown RBP20.49■□□□□ 0.87
CLN5-216ENST00000636780 PLA2G6O60733 806 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 PLS3P13797 630 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 FLT3P36888 993 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 TRAF1Q13077 416 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 SWSAP1Q6NVH7 229 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
CLN5-216ENST00000636780 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 NEUROG2Q9H2A3 272 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 R3HDMLQ9H3Y0 253 aa20.49■□□□□ 0.87
CLN5-216ENST00000636780 TNFAIP3P21580 790 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 MARCKSL1P49006 195 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 SF3B2Q13435 895 aaKnown RBP20.48■□□□□ 0.87
CLN5-216ENST00000636780 PPM1KQ8N3J5 372 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 OR2W6PQ8NHA6 318 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 EXOC4Q96A65 974 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 NOC2LQ9Y3T9 749 aaKnown RBP20.48■□□□□ 0.87
CLN5-216ENST00000636780 DLATP10515 647 aaKnown RBP20.48■□□□□ 0.87
CLN5-216ENST00000636780 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
CLN5-216ENST00000636780 ERVK-9P63128 1117 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 TNIP1Q15025 636 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 TRPM4Q8TD43 1214 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 NENFQ9UMX5 172 aa20.48■□□□□ 0.87
CLN5-216ENST00000636780 ADGRA3Q8IWK6 1321 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 CYP26A1O43174 497 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 KRT13P13646 458 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 FERP16591 822 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 HLTFQ14527 1009 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLN5-216ENST00000636780 DCAF12L1Q5VU92 463 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 NT5DC3Q86UY8 548 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 SLC47A2Q86VL8 602 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 ZIM3Q96PE6 472 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 PCDHB18PQ96TA0 734 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 SEL1LQ9UBV2 794 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 LCMT1Q9UIC8 334 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 BZW2Q9Y6E2 419 aaKnown RBP20.47■□□□□ 0.87
CLN5-216ENST00000636780 TUBBP07437 444 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 NR3C2P08235 984 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 NPTX2P47972 431 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 CEP170P1Q96L14 293 aa20.47■□□□□ 0.87
CLN5-216ENST00000636780 CEP350Q5VT06 3117 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 DENND3A2RUS2 1198 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 CTNND1O60716 968 aaKnown RBP20.46■□□□□ 0.87
CLN5-216ENST00000636780 ZBED4O75132 1171 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 ZBTB48P10074 688 aaPredicted RBP20.46■□□□□ 0.87
CLN5-216ENST00000636780 TMEM132BQ14DG7 1078 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 LRRC4CQ9HCJ2 640 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 PFASO15067 1338 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 KRIT1O00522 736 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 MCM3P25205 808 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 SP2Q02086 613 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 LLGL2Q6P1M3 1020 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 VPS36Q86VN1 386 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
CLN5-216ENST00000636780 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 DPH5Q9H2P9 285 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 ZNF541Q9H0D2 1346 aa20.46■□□□□ 0.87
CLN5-216ENST00000636780 SART1O43290 800 aaKnown RBP20.45■□□□□ 0.86
CLN5-216ENST00000636780 FTLP02792 175 aaPredicted RBP20.45■□□□□ 0.86
CLN5-216ENST00000636780 BAG6P46379 1132 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 AARSP49588 968 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLN5-216ENST00000636780 ATP1A2P50993 1020 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 WNT7BP56706 349 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 SEZ6Q53EL9 994 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 TTMPQ5BVD1 217 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 SLC39A4Q6P5W5 647 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 XXYLT1Q8NBI6 393 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms