RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 EIF2AK1Q9BQI3 630 aaKnown RBP20■□□□□ 0.79
PNKP-225ENST00000636214 TTC12Q9H892 705 aaPredicted RBP20■□□□□ 0.79
PNKP-225ENST00000636214 NGRNQ9NPE2 291 aaKnown RBP20■□□□□ 0.79
PNKP-225ENST00000636214 WRAP73Q9P2S5 460 aaPredicted RBP20■□□□□ 0.79
PNKP-225ENST00000636214 PCDHGC5Q9Y5F6 944 aa20■□□□□ 0.79
PNKP-225ENST00000636214 ERLIN2O94905 339 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 RNASELQ05823 741 aaKnown RBP19.99■□□□□ 0.79
PNKP-225ENST00000636214 ZP2Q05996 745 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 SPIRE1Q08AE8 756 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 LAMTOR4Q0VGL1 99 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 FAM184AQ8NB25 1140 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 TMEM87AQ8NBN3 555 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 TMEM169Q96HH4 297 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 ZSCAN31Q96LW9 406 aaPredicted RBP19.99■□□□□ 0.79
PNKP-225ENST00000636214 TRAIPQ9BWF2 469 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 CD320Q9NPF0 282 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 FAM105AQ9NUU6 356 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 INPP5FQ9Y2H2 1132 aa19.99■□□□□ 0.79
PNKP-225ENST00000636214 PI4K2BG5E9Z4 385 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 PER2O15055 1255 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 SEC24BO95487 1268 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 PBX3P40426 434 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 ERVFC1P60507 584 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 HMGN5P82970 282 aaKnown RBP19.98■□□□□ 0.79
PNKP-225ENST00000636214 NCBP1Q09161 790 aaKnown RBP19.98■□□□□ 0.79
PNKP-225ENST00000636214 TFDP1Q14186 410 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 MXD4Q14582 209 aaPredicted RBP19.98■□□□□ 0.79
PNKP-225ENST00000636214 LONRF3Q496Y0 759 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 RNF149Q8NC42 400 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 LLPHQ9BRT6 129 aaKnown RBP19.98■□□□□ 0.79
PNKP-225ENST00000636214 AGPAT5Q9NUQ2 364 aa19.98■□□□□ 0.79
PNKP-225ENST00000636214 BARX2Q9UMQ3 279 aaPredicted RBP19.98■□□□□ 0.79
PNKP-225ENST00000636214 ARID2Q68CP9 1835 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 FSCN2O14926 492 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.79
PNKP-225ENST00000636214 ATF7P17544 494 aaPredicted RBP19.97■□□□□ 0.79
PNKP-225ENST00000636214 MCM7P33993 719 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 GUCY1B3Q02153 619 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 COASYQ13057 564 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 DUSP6Q16828 381 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 FERMT3Q86UX7 667 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 ZNF579Q8NAF0 562 aaKnown RBP19.97■□□□□ 0.79
PNKP-225ENST00000636214 LPPQ93052 612 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 IFT122Q9HBG6 1241 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 SH2B1Q9NRF2 756 aaPredicted RBP19.97■□□□□ 0.79
PNKP-225ENST00000636214 ANKEF1Q9NU02 776 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 HCN4Q9Y3Q4 1203 aa19.97■□□□□ 0.79
PNKP-225ENST00000636214 DCXO43602 365 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 DGAT1O75907 488 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 SLITRK3O94933 977 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 LYPLA2O95372 231 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 BCAR1P56945 870 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 SMC1AQ14683 1233 aaKnown RBP19.96■□□□□ 0.79
PNKP-225ENST00000636214 PCBP1Q15365 356 aaKnown RBP eCLIP19.96■□□□□ 0.79
PNKP-225ENST00000636214 NOMO2Q5JPE7 1267 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 SLC39A11Q8N1S5 342 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 SMRP1Q8NCR6 262 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 KHSRPQ92945 711 aaKnown RBP eCLIP19.96■□□□□ 0.79
PNKP-225ENST00000636214 MSLNLQ96KJ4 702 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 LRFN3Q9BTN0 628 aa19.96■□□□□ 0.79
PNKP-225ENST00000636214 GPR37L1O60883 481 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 ZNF623O75123 536 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 EYA4O95677 639 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 ERMNQ8TAM6 284 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 FAM193BQ96PV7 902 aaPredicted RBP19.95■□□□□ 0.78
PNKP-225ENST00000636214 GBP3Q9H0R5 595 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 CLEC1BQ9P126 229 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 PCDHB2Q9Y5E7 798 aa19.95■□□□□ 0.78
PNKP-225ENST00000636214 FAM86C2PA6NEL3 165 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 INO80B-WBP1J3KQ70 363 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 ZBTB39O15060 712 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 GLP2RO95838 553 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 ST3GAL1Q11201 340 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 ORC2Q13416 577 aaPredicted RBP19.94■□□□□ 0.78
PNKP-225ENST00000636214 LLGL2Q6P1M3 1020 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 CNNM3Q8NE01 707 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 HSD17B14Q9BPX1 270 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 FOXP1Q9H334 677 aaPredicted RBP19.94■□□□□ 0.78
PNKP-225ENST00000636214 RSAD1Q9HA92 442 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 KANSL3Q9P2N6 904 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 NOL7Q9UMY1 257 aaKnown RBP19.94■□□□□ 0.78
PNKP-225ENST00000636214 CNTNAP2Q9UHC6 1331 aa19.94■□□□□ 0.78
PNKP-225ENST00000636214 C5orf42Q9H799 3197 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 POTEMA6NI47 508 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 C19orf67A6NJJ6 358 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 NT5C1B-RDH14C9J2C7 533 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 AXLP30530 894 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 TECP42680 631 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 RBM25P49756 843 aaKnown RBP19.93■□□□□ 0.78
PNKP-225ENST00000636214 NOTUMQ6P988 496 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 HACE1Q8IYU2 909 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 CASP10Q92851 521 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 CCDC51Q96ER9 411 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 MTMR9Q96QG7 549 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 MINDY3Q9H8M7 445 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 TBC1D13Q9NVG8 400 aa19.93■□□□□ 0.78
PNKP-225ENST00000636214 USP15Q9Y4E8 981 aaPredicted RBP19.93■□□□□ 0.78
PNKP-225ENST00000636214 HIDE1A8MVS5 230 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms