RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ATP9AO75110 1047 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 GDF11O95390 407 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 ATICP31939 592 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 KRT80Q6KB66 452 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 SDR42E1Q8WUS8 393 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 CCDC138Q96M89 665 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 FAM129AQ9BZQ8 928 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 COG4Q9H9E3 785 aa10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 NXF1Q9UBU9 619 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 LIMA1Q9UHB6 759 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-228ENST00000635853 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 PSAPP07602 524 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 HADHAP40939 763 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 MTERF2Q49AM1 385 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 SRRM1Q8IYB3 904 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 P2RX5Q93086 422 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 ISCUQ9H1K1 167 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 RPF1Q9H9Y2 349 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 MYL1P05976 194 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 ARL4DP49703 201 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 SH3KBP1Q96B97 665 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 COA7Q96BR5 231 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 TRIM55Q9BYV6 548 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 DBNDD1Q9H9R9 158 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 L3MBTL1Q9Y468 752 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 LONP1P36776 959 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 RFC5P40937 340 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 RAB27AP51159 221 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 MXD4Q14582 209 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 WASHC2DQ5SRD0 308 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 GALNT17Q6IS24 598 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 KCTD1Q719H9 257 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 EPM2AIP1Q7L775 607 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 GJA10Q969M2 543 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 AMNQ9BXJ7 453 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 FAM49AQ9H0Q0 323 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 PARVBQ9HBI1 364 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 DDAH1O94760 285 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 CYP21A2P08686 494 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 GSTT1P30711 240 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 OCA2Q04671 838 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 NANOGNBQ7Z5D8 188 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 LRRC34Q8IZ02 419 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 DYRK4Q9NR20 520 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 LRCH1Q9Y2L9 728 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 XDHP47989 1333 aa10.47□□□□□ -0.73
SPTAN1-228ENST00000635853 PRPSAP2O60256 369 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 CCDC22O60826 627 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ECEL1O95672 775 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 MAPK4P31152 587 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ADARP55265 1226 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 MESDQ14696 234 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 SLC9A5Q14940 896 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 MAN2A1Q16706 1144 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 HABP4Q5JVS0 413 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF554Q86TJ5 538 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF589Q86UQ0 364 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 KIAA2013Q8IYS2 634 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 DHX38Q92620 1227 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 IFT43Q96FT9 208 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 MPP4Q96JB8 637 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 CDHR1Q96JP9 859 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ZBTB18Q99592 522 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.46□□□□□ -0.734e-7■□□□□ 10.4
SPTAN1-228ENST00000635853 ZC4H2Q9NQZ6 224 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 CLCA2Q9UQC9 943 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 EFCAB14O75071 495 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 DCAF4L1Q3SXM0 396 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 SCARA5Q6ZMJ2 495 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 CATSPER1Q8NEC5 780 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 DCLRE1BQ9H816 532 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 C10orf88Q9H8K7 445 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ERVV-2B6SEH9 535 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 VIL1P09327 827 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 CHRNDQ07001 517 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 R3HDM1Q15032 1099 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ACCSLQ4AC99 568 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 PDCD6IPQ8WUM4 868 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 TMCO1Q9UM00 188 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF804BA4D1E1 1349 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 H3BRJ5 948 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 SNX2O60749 519 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 VCAM1P19320 739 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 WASHC5Q12768 1159 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 FAM47EQ6ZV65 393 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 NUDT18Q6ZVK8 323 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 TRIM59Q8IWR1 403 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 ELOA2Q8IYF1 753 aaPredicted RBP10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 DRAXINQ8NBI3 349 aaPredicted RBP10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 AGAP11Q8TF27 550 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms