RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CDC42EP1Q00587 391 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 ZP2Q05996 745 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 ADAM15Q13444 863 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 HAUS3Q68CZ6 603 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 BRAPQ7Z569 592 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 THNSL1Q8IYQ7 743 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 GJD3Q8N144 294 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 SLC7A3Q8WY07 619 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 TMEM143Q96AN5 459 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 HSD17B14Q9BPX1 270 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 GCOM2Q9BZD3 368 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-209ENST00000635450 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.34■□□□□ 0.37
LINC00339-209ENST00000635450 CLEC1BQ9P126 229 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 BARX2Q9UMQ3 279 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-209ENST00000635450 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
LINC00339-209ENST00000635450 A0A0U1RQF3 1178 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 PER2O15055 1255 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 MBTPS2O43462 519 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 B4GALT3O60512 393 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 LYPLA2O95372 231 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 SSTR3P32745 418 aaPredicted RBP17.33■□□□□ 0.36
LINC00339-209ENST00000635450 RFC5P40937 340 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 FXR2P51116 673 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC00339-209ENST00000635450 LRRC43Q8N309 656 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 MSLNLQ96KJ4 702 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 DHX33Q9H6R0 707 aaKnown RBP17.33■□□□□ 0.36
LINC00339-209ENST00000635450 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 TLR9Q9NR96 1032 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 ANKEF1Q9NU02 776 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 PIN4Q9Y237 131 aaKnown RBP17.33■□□□□ 0.36
LINC00339-209ENST00000635450 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 STK24Q9Y6E0 443 aa17.33■□□□□ 0.36
LINC00339-209ENST00000635450 A0A087WWV3 80 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 FSCN2O14926 492 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 GAS2O43903 313 aaKnown RBP17.32■□□□□ 0.36
LINC00339-209ENST00000635450 LAG3P18627 525 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 SYT1P21579 422 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 PRPHP41219 470 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 PHKA2P46019 1235 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 NDUFV1P49821 464 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 EMC2Q15006 297 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 DTHD1Q6ZMT9 781 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 ZNF410Q86VK4 478 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 TMEM173Q86WV6 379 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-209ENST00000635450 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
LINC00339-209ENST00000635450 LRWD1Q9UFC0 647 aa17.32■□□□□ 0.36
LINC00339-209ENST00000635450 HIDE1A8MVS5 230 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 RPA1P27694 616 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 SMAD4Q13485 552 aaKnown RBP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 PDIA5Q14554 519 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 SMAD2Q15796 467 aaKnown RBP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 TWF2Q6IBS0 349 aaKnown RBP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 FERMT3Q86UX7 667 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 CATSPER3Q86XQ3 398 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 TCP11Q8WWU5 503 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 LRFN3Q9BTN0 628 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 AAASQ9NRG9 546 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 CD207Q9UJ71 328 aa17.31■□□□□ 0.36
LINC00339-209ENST00000635450 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
LINC00339-209ENST00000635450 NT5C1B-RDH14C9J2C7 533 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 HOXA2O43364 376 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 NCK2O43639 380 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 MED24O75448 989 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 SRGAP2CP0DJJ0 459 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 MUTP22033 750 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 CCT6AP40227 531 aaKnown RBP17.3■□□□□ 0.36
LINC00339-209ENST00000635450 ATP2C1P98194 919 aaPredicted RBP17.3■□□□□ 0.36
LINC00339-209ENST00000635450 UBE3AQ05086 875 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 LAMTOR4Q0VGL1 99 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 PUS10Q3MIT2 529 aaKnown RBP17.3■□□□□ 0.36
LINC00339-209ENST00000635450 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 MICAL1Q8TDZ2 1067 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 PIGOQ8TEQ8 1089 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
LINC00339-209ENST00000635450 ZNF558Q96NG5 402 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 MTRQ99707 1265 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 TLE6Q9H808 572 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 AGPAT5Q9NUQ2 364 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
LINC00339-209ENST00000635450 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 PI4K2BG5E9Z4 385 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 DGAT1O75907 488 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 BMP15O95972 392 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 AFF1P51825 1210 aaKnown RBP17.29■□□□□ 0.36
LINC00339-209ENST00000635450 DUSP6Q16828 381 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 KRT79Q5XKE5 535 aa17.29■□□□□ 0.36
LINC00339-209ENST00000635450 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms