RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 SMTNP53814 917 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 DLG4P78352 724 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 ANO5Q75V66 913 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 TAF4BQ92750 862 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 GPR88Q9GZN0 384 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 VIPAS39Q9H9C1 493 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 PACSIN2Q9UNF0 486 aaPredicted RBP13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 EXOC7Q9UPT5 735 aa13.29□□□□□ -0.28
PHACTR4-206ENST00000632421 A0A0A6YYK5 440 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 ATP2A1O14983 1001 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 MAPK13O15264 365 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 P4HA2O15460 535 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 LMO3Q8TAP4 145 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 LNX1Q8TBB1 728 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 ACAD9Q9H845 621 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 CCDC169A6NNP5 214 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 KCNA2P16389 499 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 LRRC57Q8N9N7 239 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 HDAC7Q8WUI4 952 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 GABBR1Q9UBS5 961 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 PPP2R3BQ9Y5P8 575 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 C8orf74Q6P047 294 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 GLYCTKQ8IVS8 523 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 TPCN2Q8NHX9 752 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 HVCN1Q96D96 273 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 CDHR1Q96JP9 859 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
PHACTR4-206ENST00000632421 CES2O00748 559 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 MYBL2P10244 700 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 GCLMP48507 274 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 GLE1Q53GS7 698 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 GSPT2Q8IYD1 628 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 CEP170P1Q96L14 293 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 A1CFQ9NQ94 594 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 STIM2Q9P246 746 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 TBX20Q9UMR3 447 aa13.27□□□□□ -0.28
PHACTR4-206ENST00000632421 RGS20O76081 388 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 KIF4AO95239 1232 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 PSAPP07602 524 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 NPTX2P47972 431 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 GALCP54803 685 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 KIFAP3Q92845 792 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 VTI1AQ96AJ9 217 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 SYT11Q9BT88 431 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 JPH1Q9HDC5 661 aaPredicted RBP13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 HOXC10Q9NYD6 342 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 RSPH14Q9UHP6 348 aa13.27□□□□□ -0.29
PHACTR4-206ENST00000632421 NFASCO94856 1347 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 ZNF862O60290 1169 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 KIF22Q14807 665 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 ZSWIM2Q8NEG5 633 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 FOXN3O00409 490 aaPredicted RBP13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 KCNK3O14649 394 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 LRRN2O75325 713 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 STAM2O75886 525 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SUPT20HL1Q3ZLR7 823 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 C1orf220Q5T0J3 134 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 UBE2TQ9NPD8 197 aaPredicted RBP13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 AFG3L2Q9Y4W6 797 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 GNPTABQ3T906 1256 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SWSAP1Q6NVH7 229 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SYCE1Q8N0S2 351 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 PLEKHO2Q8TD55 490 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms