RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM13AO94988 1023 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 VTNP04004 478 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 CKBP12277 381 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 CASP1P29466 404 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 NPTX2P47972 431 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 NCKAP1LP55160 1127 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 RAD51AP2Q09MP3 1159 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 COASYQ13057 564 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 DMP1Q13316 513 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 PNOCQ13519 176 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 TFDP1Q14186 410 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 KCNB1Q14721 858 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 RBM43Q6ZSC3 357 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 MAEAQ7L5Y9 396 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 CCDC65Q8IXS2 484 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 GSDMAQ96QA5 445 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 NUP62CLQ9H1M0 184 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 ST6GALNAC4Q9H4F1 302 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 IFT122Q9HBG6 1241 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 ARHGAP28Q9P2N2 729 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 TRPV2Q9Y5S1 764 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 CDY2AQ9Y6F7 541 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 SQORQ9Y6N5 450 aa10.88□□□□□ -0.67
SOX2-OT-249ENST00000628810 PHLPP2Q6ZVD8 1323 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 ADGRA3Q8IWK6 1321 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 RHOBTB3O94955 611 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 SMC2O95347 1197 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 PARNO95453 639 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 CHRNA1P02708 482 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 RPN1P04843 607 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 SELPP16109 830 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 ABCD1P33897 745 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 THPOP40225 353 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 CRYBB1P53674 252 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 NLRP11P59045 1033 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 PTENP60484 403 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 PCBP1Q15365 356 aaKnown RBP eCLIP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 SKOR2Q2VWA4 1001 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 LRRC8DQ7L1W4 858 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 SFR1Q86XK3 245 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 KSR1Q8IVT5 923 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 RNF149Q8NC42 400 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 IFT74Q96LB3 600 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 STRA6Q9BX79 667 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 CELF4Q9BZC1 486 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 WNT8AQ9H1J5 351 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 C2orf40Q9H1Z8 148 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
SOX2-OT-249ENST00000628810 A0A087WZ62 844 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 SFI1A8K8P3 1242 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 H0YCG3 227 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 M0QZ92 97 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TRAK2O60296 914 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 EVI5O60447 810 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 IDEP14735 1019 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 PHKA2P46019 1235 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 RGS19P49795 217 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 SMTNP53814 917 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 PEX3P56589 373 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 PSMD2Q13200 908 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 ALCAMQ13740 583 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 KIZQ2M2Z5 673 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 KMT5BQ4FZB7 885 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 COBLL1Q53SF7 1204 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM26FQ5R3K3 315 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 CCDC183Q5T5S1 534 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM43BQ6ZT52 329 aaPredicted RBP10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 SRGAP1Q7Z6B7 1085 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 FAM178BQ8IXR5 827 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TMEM161BQ8NDZ6 487 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TMEM40Q8WWA1 233 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TRIM43Q96BQ3 446 aaPredicted RBP10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 HVCN1Q96D96 273 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 NLRP4Q96MN2 994 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 FDXACB1Q9BRP7 624 aaPredicted RBP10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 POLD4Q9HCU8 107 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 KMT5AQ9NQR1 393 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 TMEM39AQ9NV64 488 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 EXOC1Q9NV70 894 aa10.86□□□□□ -0.67
SOX2-OT-249ENST00000628810 RMND1Q9NWS8 449 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms