RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 WRAP73Q9P2S5 460 aaPredicted RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 MUTYHQ9UIF7 546 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 PIN4Q9Y237 131 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 COL4A3BPQ9Y5P4 624 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 TECTAO75443 2155 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 ASAP2O43150 1006 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 KRT2P35908 639 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 BCAR1P56945 870 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 RBM10P98175 930 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 MRPL43Q8N983 215 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 EDAQ92838 391 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 CEP170P1Q96L14 293 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 NLRP4Q96MN2 994 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZSWIM4Q9H7M6 989 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 BRMS1Q9HCU9 246 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZNF318Q5VUA4 2279 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
SOX2-OT-247ENST00000628347 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 C2orf71A6NGG8 1288 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 MARCH6O60337 910 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 TECP42680 631 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 ALDH7A1P49419 539 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 NR5A1Q13285 461 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 ME3Q16798 604 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 GLB1LQ6UWU2 654 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 MRPL10Q7Z7H8 261 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 TCP11Q8WWU5 503 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 PRPF31Q8WWY3 499 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 CASP10Q92851 521 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 PGBD4Q96DM1 585 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 TMEM169Q96HH4 297 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 DYDC2Q96IM9 177 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 RGL1Q9NZL6 768 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 IRAK3Q9Y616 596 aa13.93□□□□□ -0.18
SOX2-OT-247ENST00000628347 FAM205CA6NFA0 338 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 OFD1O75665 1012 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 LYPLA2O95372 231 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 LARGE1O95461 756 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 LAMTOR4Q0VGL1 99 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 EMC2Q15006 297 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 BMP8AQ7Z5Y6 402 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 LPPQ93052 612 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 IGSF21Q96ID5 467 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 TBC1D13Q9NVG8 400 aa13.92□□□□□ -0.18
SOX2-OT-247ENST00000628347 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 MEIS3P2A8K0S8 358 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 NT5C1B-RDH14C9J2C7 533 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 SLITRK3O94933 977 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 GALTP07902 379 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 HOXA11P31270 313 aaPredicted RBP13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 GIT2Q14161 759 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 AGMOQ6ZNB7 445 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 HFE2Q6ZVN8 426 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 DDX53Q86TM3 631 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 IFNLR1Q8IU57 520 aaPredicted RBP13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 MTRQ99707 1265 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 HSD17B14Q9BPX1 270 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 PCDHB2Q9Y5E7 798 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
SOX2-OT-247ENST00000628347 DTNBO60941 627 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CXCL14O95715 111 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 SRGAP2CP0DJJ0 459 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 CTSAP10619 480 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 AXLP30530 894 aa13.9□□□□□ -0.18
SOX2-OT-247ENST00000628347 ZXDAP98168 799 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms