RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 CCDC51Q96ER9 411 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 PRIMPOLQ96LW4 560 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 NLRP4Q96MN2 994 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 FDXACB1Q9BRP7 624 aaPredicted RBP8.9□□□□□ -0.98
CHD2-213ENST00000628118 TRAIPQ9BWF2 469 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 AGO3Q9H9G7 860 aaKnown RBP8.9□□□□□ -0.98
CHD2-213ENST00000628118 IFT122Q9HBG6 1241 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 BLOC1S4Q9NUP1 217 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 DACT1Q9NYF0 836 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 USP25Q9UHP3 1055 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 PCDHA7Q9UN72 937 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 ST3GAL5Q9UNP4 418 aa8.9□□□□□ -0.98
CHD2-213ENST00000628118 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
CHD2-213ENST00000628118 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
CHD2-213ENST00000628118 TTC3P53804 2025 aa8.9□□□□□ -0.99
CHD2-213ENST00000628118 A0A1W2PQ27 194 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 A0A1W2PQ64 194 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 A0A1W2PQD8 194 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SSBP05455 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
CHD2-213ENST00000628118 STAG3L1P0CL83 205 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SRGAP2CP0DJJ0 459 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 ATP2A2P16615 1042 aaKnown RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 CMA1P23946 247 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SMTNP53814 917 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 CAPSQ13938 189 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 FAM187BQ17R55 369 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SPECC1Q5M775 1068 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 RESP18Q5W5W9 173 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 CDCA2Q69YH5 1023 aaPredicted RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 SHC4Q6S5L8 630 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SV2BQ7L1I2 683 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 DEPTORQ8TB45 409 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 TMEM40Q8WWA1 233 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 CCDC34Q96HJ3 373 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 IPO9Q96P70 1041 aaKnown RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 TNMDQ9H2S6 317 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 ELAC1Q9H777 363 aaKnown RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 CDHR5Q9HBB8 845 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 RGS18Q9NS28 235 aa8.89□□□□□ -0.99
CHD2-213ENST00000628118 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 LARSQ9P2J5 1176 aaKnown RBP8.89□□□□□ -0.99
CHD2-213ENST00000628118 MYH11P35749 1972 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 A0A087WWV3 80 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 FAM237AA0A1B0GTK4 181 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 DENND3A2RUS2 1198 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 LRRIQ4A6NIV6 560 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 ENPP3O14638 875 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 HOXA2O43364 376 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 HIP1RO75146 1068 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 ERLIN2O94905 339 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 GJB5O95377 273 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 KRT18P05783 430 aaKnown RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 MYL1P05976 194 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 PLS3P13797 630 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 SARSP49591 514 aaKnown RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 RAB27AP51159 221 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 MCM6Q14566 821 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 DSC3Q14574 896 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 MAPK6Q16659 721 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 USP49Q70CQ1 688 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 SLC24A5Q71RS6 500 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 MAEAQ7L5Y9 396 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 CATSPER4Q7RTX7 472 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 GPBP1Q86WP2 473 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 NPAS4Q8IUM7 802 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 KSR1Q8IVT5 923 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 HERC6Q8IVU3 1022 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 CNNM3Q8NE01 707 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 TOP1MTQ969P6 601 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 PPP1R16BQ96T49 567 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 PLIN2Q99541 437 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 RUSC1Q9BVN2 902 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 TMX1Q9H3N1 280 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 PARVGQ9HBI0 331 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 GPRC5CQ9NQ84 441 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 AGPAT5Q9NUQ2 364 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 CXXC1Q9P0U4 656 aaPredicted RBP8.88□□□□□ -0.99
CHD2-213ENST00000628118 SEL1LQ9UBV2 794 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 MSRAQ9UJ68 235 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 PCDHA11Q9Y5I1 949 aa8.88□□□□□ -0.99
CHD2-213ENST00000628118 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.87□□□□□ -0.99
CHD2-213ENST00000628118 CARNS1A5YM72 827 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 GOLGA6L4A6NEF3 574 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 C9IYK1 514 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 INO80B-WBP1J3KQ70 363 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 ZNF623O75123 536 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 TBCAO75347 108 aaKnown RBP8.87□□□□□ -0.99
CHD2-213ENST00000628118 FAM13AO94988 1023 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 EOMESO95936 686 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 GAP43P17677 238 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 ZNF131P52739 623 aa8.87□□□□□ -0.99
CHD2-213ENST00000628118 PEX3P56589 373 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms