RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 TNFAIP2Q03169 654 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 KCNA1Q09470 495 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 IRF5Q13568 498 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 PLCB4Q15147 1175 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 TARBP2Q15633 366 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 FILIP1LQ4L180 1135 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 TJAP1Q5JTD0 557 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 VSTM4Q8IW00 320 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 OR6J1Q8NGC5 347 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 PPTC7Q8NI37 304 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 ATP8B4Q8TF62 1192 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 KIFAP3Q92845 792 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 STRA6Q9BX79 667 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 VPS16Q9H269 839 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 DHX33Q9H6R0 707 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 TYW1Q9NV66 732 aaKnown RBP10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 MYH11P35749 1972 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 MGAMO43451 1857 aa10.93□□□□□ -0.66
SOX2-OT-244ENST00000627738 CCDC169A6NNP5 214 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 N4BP3O15049 544 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 SLC16A4O15374 487 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 TEX33O43247 280 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 IGHA2P01877 340 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 LGALS2P05162 132 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 VEGFBP49765 207 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 SLC26A2P50443 739 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 NCKAP1LP55160 1127 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 HTRA3P83110 453 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 SP3Q02447 781 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 DMP1Q13316 513 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 ALCAMQ13740 583 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 EDRF1Q3B7T1 1238 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZC3H3Q8IXZ2 948 aaKnown RBP10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 BSNDQ8WZ55 320 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 POLR3FQ9H1D9 316 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 RNF186Q9NXI6 227 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 PPME1Q9Y570 386 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 PCDHB3Q9Y5E6 796 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZSWIM8A7E2V4 1837 aa10.92□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZMYM2Q9UBW7 1377 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 CETN3O15182 167 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 CLIC2O15247 247 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 DYNC1LI2O43237 492 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 TGFB1I1O43294 461 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 HBP1O60381 514 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 MAFO75444 373 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 TRPA1O75762 1119 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 MMP3P08254 477 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 NR2F2P24468 414 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 MAP2K2P36507 400 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 MTIF2P46199 727 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 NPTX2P47972 431 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 FLT3LGP49771 235 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 SMTNP53814 917 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 RTP1P59025 263 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 GTF2BQ00403 316 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 CAP1Q01518 475 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 PRKCZQ05513 592 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ADAM9Q13443 819 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 KIF22Q14807 665 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 HAUS6Q7Z4H7 955 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 SYCP3Q8IZU3 236 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 SLC7A3Q8WY07 619 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 TMEM143Q96AN5 459 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 IFT74Q96LB3 600 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 CEP63Q96MT8 703 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZNF830Q96NB3 372 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ACCSQ96QU6 501 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 TUBGCP2Q9BSJ2 902 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 KIFC3Q9BVG8 833 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 IKZF4Q9H2S9 585 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ST6GALNAC4Q9H4F1 302 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 C17orf75Q9HAS0 396 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 KMT5AQ9NQR1 393 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ERAP1Q9NZ08 941 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 IMPACTQ9P2X3 320 aa10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZBTB42B2RXF5 422 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 PES1O00541 588 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 GFRA3O60609 400 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 NR3C1P04150 777 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 TPM2P07951 284 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 ZNF286BP0CG31 522 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 ARL2P36404 184 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 UBXN1Q04323 297 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 TBC1D8BQ0IIM8 1120 aa10.9□□□□□ -0.66
SOX2-OT-244ENST00000627738 CCDC40Q4G0X9 1142 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms