RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 POU3F2P20265 443 aaPredicted RBP4.79□□□□□ -1.64
VBP1-204ENST00000625964 ECE1P42892 770 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 RABL3Q5HYI8 236 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 CC2D1AQ6P1N0 951 aaPredicted RBP4.79□□□□□ -1.64
VBP1-204ENST00000625964 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 VRK3Q8IV63 474 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 GPR87Q9BY21 358 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 VWA7Q9Y334 891 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 ASB1Q9Y576 335 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 COL4A3Q01955 1670 aa4.79□□□□□ -1.64
VBP1-204ENST00000625964 GRID2IPA4D2P6 1211 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 FAM83GA6ND36 823 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
VBP1-204ENST00000625964 ABHD16AO95870 558 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 ITGB1P05556 798 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 MYCLP1P12525 358 aaPredicted RBP4.78□□□□□ -1.64
VBP1-204ENST00000625964 HSD3B2P26439 372 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 GYS2P54840 703 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 CD83Q01151 205 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 PCBP1Q15365 356 aaKnown RBP eCLIP4.78□□□□□ -1.64
VBP1-204ENST00000625964 ZNF362Q5T0B9 420 aaPredicted RBP4.78□□□□□ -1.64
VBP1-204ENST00000625964 KANK2Q63ZY3 851 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 GRAMD4Q6IC98 578 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 AHI1Q8N157 1196 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 NXPE1Q8N323 547 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 PROKR1Q8TCW9 393 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 AMNQ9BXJ7 453 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 MTFR1LQ9H019 292 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.78□□□□□ -1.64
VBP1-204ENST00000625964 ACSS2Q9NR19 701 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 IFT57Q9NWB7 429 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 OXSMQ9NWU1 459 aa4.78□□□□□ -1.64
VBP1-204ENST00000625964 GOLGA6L6A8MZA4 724 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 B3GALT2O43825 422 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 PDE8AO60658 829 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 F2P00734 622 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 SLC9A1P19634 815 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 FNTBP49356 437 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 MOGSQ13724 837 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 SART3Q15020 963 aaKnown RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 OLFML1Q6UWY5 402 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 MICALCLQ6ZW33 695 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 KIF18BQ86Y91 864 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 CALML6Q8TD86 181 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 ORAI3Q9BRQ5 295 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 OR10A5Q9H207 317 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 TOMM22Q9NS69 142 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 THG1LQ9NWX6 298 aaKnown RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 H2AFY2Q9P0M6 372 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 TRPS1Q9UHF7 1281 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 CTDP1Q9Y5B0 961 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 GSG1L2A8MUP6 293 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 GOLGA6L22H0YM25 854 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 CLSTN1O94985 981 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 CYP17A1P05093 508 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 SESN2P58004 480 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 DSG1Q02413 1049 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 SEPT7Q16181 437 aaKnown RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 HECTD2Q5U5R9 776 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 CREB3L3Q68CJ9 461 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 HTR3DQ70Z44 454 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 RTN4RL1Q86UN2 441 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 CHTF18Q8WVB6 975 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 LEO1Q8WVC0 666 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 E2F7Q96AV8 911 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 ELF4Q99607 663 aaPredicted RBP4.77□□□□□ -1.65
VBP1-204ENST00000625964 SYNPO2LQ9H987 977 aa4.77□□□□□ -1.65
VBP1-204ENST00000625964 A0A087X0B3 334 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 FAM20BO75063 409 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 MAFO75444 373 aaPredicted RBP4.76□□□□□ -1.65
VBP1-204ENST00000625964 SCNN1BP51168 640 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 ADCY7P51828 1080 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 SLC6A3Q01959 620 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 ELAVL1Q15717 326 aaKnown RBP4.76□□□□□ -1.65
VBP1-204ENST00000625964 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 FAM111BQ6SJ93 734 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 LRRC55Q6ZSA7 311 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 OR2W6PQ8NHA6 318 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 FOXRED1Q96CU9 486 aaPredicted RBP4.76□□□□□ -1.65
VBP1-204ENST00000625964 GPR101Q96P66 508 aaPredicted RBP4.76□□□□□ -1.65
VBP1-204ENST00000625964 FOXB1Q99853 325 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 MLST8Q9BVC4 326 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 SLC6A15Q9H2J7 730 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 HS3ST4Q9Y661 456 aa4.76□□□□□ -1.65
VBP1-204ENST00000625964 UBA6A0AVT1 1052 aaPredicted RBP4.75□□□□□ -1.65
VBP1-204ENST00000625964 PRLP01236 227 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 APEX1P27695 318 aaKnown RBP4.75□□□□□ -1.65
VBP1-204ENST00000625964 KPNA1P52294 538 aaPredicted RBP4.75□□□□□ -1.65
VBP1-204ENST00000625964 RABGGTBP53611 331 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 IL2P60568 153 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 ALDH6A1Q02252 535 aaKnown RBP4.75□□□□□ -1.65
VBP1-204ENST00000625964 ROM1Q03395 351 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 SAFB2Q14151 953 aaKnown RBP eCLIP4.75□□□□□ -1.65
VBP1-204ENST00000625964 PRAMEF9Q5VWM5 478 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 SLFN12LQ6IEE8 588 aa4.75□□□□□ -1.65
VBP1-204ENST00000625964 ESRP1Q6NXG1 681 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms