RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 NPY5RQ15761 445 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 INF2Q27J81 1249 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 LONRF3Q496Y0 759 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 ANO5Q75V66 913 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 KREMEN2Q8NCW0 462 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 ZNF274Q96GC6 653 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-215ENST00000625617 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 TBC1D13Q9NVG8 400 aa16.23■□□□□ 0.19
TUBB3-215ENST00000625617 C2CD4DB7Z1M9 353 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
TUBB3-215ENST00000625617 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
TUBB3-215ENST00000625617 CTSAP10619 480 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 TCF15Q12870 199 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 STK3Q13188 491 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 GIT2Q14161 759 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 LETM2Q2VYF4 491 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 RARS2Q5T160 578 aaKnown RBP16.22■□□□□ 0.19
TUBB3-215ENST00000625617 DDX53Q86TM3 631 aaKnown RBP16.22■□□□□ 0.19
TUBB3-215ENST00000625617 KSR1Q8IVT5 923 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 AUTS2Q8WXX7 1259 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 SLC7A3Q8WY07 619 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 IGSF21Q96ID5 467 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 PHOX2BQ99453 314 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 GBP3Q9H0R5 595 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 NRDE2Q9H7Z3 1164 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 CYP26B1Q9NR63 512 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 SORCS3Q9UPU3 1222 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 COL4A3BPQ9Y5P4 624 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
TUBB3-215ENST00000625617 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 ZNF623O75123 536 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 GCFC2P16383 781 aaKnown RBP16.21■□□□□ 0.19
TUBB3-215ENST00000625617 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
TUBB3-215ENST00000625617 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 KIAA1841Q6NSI8 718 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 UBALD2Q8IYN6 164 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 TDRD5Q8NAT2 981 aaKnown RBP16.21■□□□□ 0.19
TUBB3-215ENST00000625617 URGCPQ8TCY9 931 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-215ENST00000625617 PGBD4Q96DM1 585 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
TUBB3-215ENST00000625617 VAV3Q9UKW4 847 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 IRAK3Q9Y616 596 aa16.21■□□□□ 0.19
TUBB3-215ENST00000625617 EML1O00423 815 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 OFD1O75665 1012 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 CDKL5O76039 1030 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 GALTP07902 379 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 WEE2P0C1S8 567 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 EPCAMP16422 314 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 AVPR2P30518 371 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 SLC11A1P49279 550 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 NPEPPSP55786 919 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 NEK8Q86SG6 692 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 C12orf76Q8N812 135 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-215ENST00000625617 PSPC1Q8WXF1 523 aaKnown RBP16.2■□□□□ 0.18
TUBB3-215ENST00000625617 CEP170P1Q96L14 293 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 FAM20AQ96MK3 541 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 SLKQ9H2G2 1235 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-215ENST00000625617 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 DNAJB4Q9UDY4 337 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 PPME1Q9Y570 386 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 WDFY4Q6ZS81 3184 aa16.2■□□□□ 0.18
TUBB3-215ENST00000625617 SPDYE4A6NLX3 237 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 PDGFBP01127 241 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-215ENST00000625617 RFC5P40937 340 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 PTPN14Q15678 1187 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 ATAT1Q5SQI0 421 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 CABP7Q86V35 215 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 EXOC8Q8IYI6 725 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 LXNQ9BS40 222 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 IRF2BPLQ9H1B7 796 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
TUBB3-215ENST00000625617 SFXN1Q9H9B4 322 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 RSAD1Q9HA92 442 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-215ENST00000625617 STK39Q9UEW8 545 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 DBR1Q9UK59 544 aaKnown RBP16.19■□□□□ 0.18
TUBB3-215ENST00000625617 TRIOO75962 3097 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
TUBB3-215ENST00000625617 GAS2O43903 313 aaKnown RBP16.18■□□□□ 0.18
TUBB3-215ENST00000625617 B4GALT3O60512 393 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 BRD1O95696 1058 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 P4HBP07237 508 aaKnown RBP16.18■□□□□ 0.18
TUBB3-215ENST00000625617 XBP1P17861 261 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 AGMOQ6ZNB7 445 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 ZDHHC14Q8IZN3 488 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 SLC22A17Q8WUG5 538 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
TUBB3-215ENST00000625617 VN1R3Q9BXE9 311 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms