RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 TBC1D9BQ66K14 1250 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 DDX42Q86XP3 938 aaKnown RBP eCLIP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 RNPC3Q96LT9 517 aaKnown RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TRIM51Q9BSJ1 452 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ALG13Q9NP73 1137 aaKnown RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 DCP1AQ9NPI6 582 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 INPP5FQ9Y2H2 1132 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 PRPSAP2O60256 369 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TJP3O95049 919 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ARL4CP56559 192 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 GRIN1Q05586 938 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 DPYDQ12882 1025 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 MKRN4PQ13434 485 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 SLC12A1Q13621 1099 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 NCAPHQ15003 741 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TMEM259Q4ZIN3 620 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 RSBN1LQ6PCB5 846 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TRMT10CQ7L0Y3 403 aaKnown RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ADSSL1Q8N142 457 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF564Q8TBZ8 553 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 DEPDC1BQ8WUY9 529 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 HSPH1Q92598 858 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZIM3Q96PE6 472 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TRIM56Q9BRZ2 755 aaKnown RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 MXD3Q9BW11 206 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 NUP85Q9BW27 656 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 TRIM9Q9C026 710 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 FGFR1OP2Q9NVK5 253 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 PSD3Q9NYI0 1048 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 PNMA2Q9UL42 364 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 THSD7AQ9UPZ6 1657 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF609O15014 1411 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZBBXA8MT70 800 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 PI4K2BG5E9Z4 385 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 H2AFXP16104 143 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ARFIP2P53365 341 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 STK4Q13043 487 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ALX1Q15699 326 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ERICH1Q86X53 443 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 MYLK4Q86YV6 388 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 SLC17A8Q8NDX2 589 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 FAF2Q96CS3 445 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF408Q9H9D4 720 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 DBNDD1Q9H9R9 158 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 NGRNQ9NPE2 291 aaKnown RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF277Q9NRM2 450 aaPredicted RBP6.02□□□□□ -1.45
ERCC6-213ENST00000624341 BCS1LQ9Y276 419 aa6.02□□□□□ -1.45
ERCC6-213ENST00000624341 SPATA31A5Q5VU36 1347 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SPATA31A7Q8IWB4 1347 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 hCG_2014768A0A024R1R8 64 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 FAM187AA6NFU0 413 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ERVV-1B6SEH8 477 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 GNGT2O14610 69 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 WDR46O15213 610 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SRGNP10124 158 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 CHN1P15882 459 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 EIF2AK2P19525 551 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 PSMA2P25787 234 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 HOXA7P31268 230 aaPredicted RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ELF1P32519 619 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 STAT3P40763 770 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 STAT2P52630 851 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 CORO7P57737 925 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 MDM2Q00987 491 aaPredicted RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 BYSLQ13895 437 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 MUM1L1Q5H9M0 696 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 PPP6R3Q5H9R7 873 aaPredicted RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SRBD1Q8N5C6 995 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ANKRD36BP1Q96IX9 119 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SENP2Q9HC62 589 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 EHD2Q9NZN4 543 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 CCDC195A0A1B0GUA6 201 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF233A6NK53 670 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SPDYE16A6NNV3 312 aaPredicted RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 HNRNPH1P31943 449 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ARL4AP40617 200 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 KCNB1Q14721 858 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SPDYE2Q495Y8 402 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 RGS9BPQ6ZS82 235 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ATG9AQ7Z3C6 839 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 NIM1KQ8IY84 436 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 PPM1NQ8N819 430 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 XXYLT1Q8NBI6 393 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 DTX3LQ8TDB6 740 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SERPINI1Q99574 410 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SLC38A10Q9HBR0 1119 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 DBR1Q9UK59 544 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SUFUQ9UMX1 484 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 APOBEC2Q9Y235 224 aaKnown RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 HSPA4LO95757 839 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 STMN1P16949 149 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ZNF18P17022 549 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 KLK7P49862 253 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 GPS1Q13098 491 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SPATA21Q7Z572 469 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 ZBED8Q8IZ13 594 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 RFFLQ8WZ73 363 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 DACT3Q96B18 629 aaPredicted RBP6.01□□□□□ -1.45
ERCC6-213ENST00000624341 CEP95Q96GE4 821 aa6.01□□□□□ -1.45
ERCC6-213ENST00000624341 SEC16BQ96JE7 1060 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms