RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 LMBR1Q8WVP7 490 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 FGF13Q92913 245 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
CDKL5-204ENST00000623364 NT5C3AQ9H0P0 336 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 C2orf42Q9NWW7 574 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 TMEM161AQ9NX61 479 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 KIAA1522Q9P206 1035 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-204ENST00000623364 PIAS3Q9Y6X2 628 aa7.58□□□□□ -1.2
CDKL5-204ENST00000623364 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 M0QZ92 97 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 NFIBO00712 420 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 ECI2O75521 394 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 GLUD1P00367 558 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 RPLP2P05387 115 aaKnown RBP7.57□□□□□ -1.2
CDKL5-204ENST00000623364 RPL17P18621 184 aaKnown RBP7.57□□□□□ -1.2
CDKL5-204ENST00000623364 ADAM17P78536 824 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 CAMK2BQ13554 666 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 HSDL1Q3SXM5 330 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 DGKKQ5KSL6 1271 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 TICAM1Q8IUC6 712 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 STAG1Q8WVM7 1258 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 NXPE2Q96DL1 559 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 CASD1Q96PB1 797 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 BRD9Q9H8M2 597 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 RBM12Q9NTZ6 932 aaKnown RBP7.57□□□□□ -1.2
CDKL5-204ENST00000623364 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
CDKL5-204ENST00000623364 MRVI1Q9Y6F6 885 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 NBASA2RRP1 2371 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 KIF26AQ9ULI4 1882 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-204ENST00000623364 DNHD1Q96M86 4753 aa7.57□□□□□ -1.2
CDKL5-204ENST00000623364 NT5C1B-RDH14C9J2C7 533 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 TLX3O43711 291 aaPredicted RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 PAPLNO95428 1278 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ICAM1P05362 532 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ADH1AP07327 375 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 MYBP10242 640 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 CCNE1P24864 410 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 PI4KAP42356 2102 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 BCAR1P56945 870 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 SNAP25P60880 206 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 SEMG2Q02383 582 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 RNASELQ05823 741 aaKnown RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 NFX1Q12986 1120 aaKnown RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 STXBP2Q15833 593 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 MYSM1Q5VVJ2 828 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 C1orf228Q6PIY5 440 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 SLCO6A1Q86UG4 719 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 C11orf74Q86VG3 221 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 MARCH9Q86YJ5 346 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 SRRM1Q8IYB3 904 aaKnown RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 HDAC7Q8WUI4 952 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 DNAJB3Q8WWF6 145 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 TTC9Q92623 222 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 PIGKQ92643 395 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 FAM212AQ96EL1 285 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 CAMK1GQ96NX5 476 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ADAM2Q99965 735 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ELAC1Q9H777 363 aaKnown RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 RGS18Q9NS28 235 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ZDHHC7Q9NXF8 308 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 CLIP2Q9UDT6 1046 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 MBD1Q9UIS9 605 aaPredicted RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 SLC8A2Q9UPR5 921 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ANKHD1Q8IWZ3 2542 aaKnown RBP7.56□□□□□ -1.2
CDKL5-204ENST00000623364 WDR81Q562E7 1941 aa7.56□□□□□ -1.2
CDKL5-204ENST00000623364 ABCA7Q8IZY2 2146 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 IGSF9BQ9UPX0 1349 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 EML5Q05BV3 1969 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 C9IYK1 514 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 DCLK1O15075 740 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 EXTL3O43909 919 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 SH3BP5O60239 455 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 IDH1O75874 414 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 LGALS2P05162 132 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 C8BP07358 591 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 CD59P13987 128 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 UCNP55089 124 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 RPS6P62753 249 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 KCNH2Q12809 1159 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 ZNF280BQ86YH2 543 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 TMC8Q8IU68 726 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 AMOTL1Q8IY63 956 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 GMCL1P1Q8NEA9 526 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 IRF7Q92985 503 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 TSR2Q969E8 191 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 MOCOSQ96EN8 888 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 STK39Q9UEW8 545 aa7.55□□□□□ -1.2
CDKL5-204ENST00000623364 ZNF215Q9UL58 517 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-204ENST00000623364 FN1P02751 2386 aaKnown RBP7.54□□□□□ -1.2
CDKL5-204ENST00000623364 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms