RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 IWS1Q96ST2 819 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 DMAP1Q9NPF5 467 aaPredicted RBP13.43□□□□□ -0.26
LITAF-221ENST00000622633 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 ADAMTS1Q9UHI8 967 aa13.43□□□□□ -0.26
LITAF-221ENST00000622633 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 CEP104O60308 925 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 GLI1P08151 1106 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 ACTN1P12814 892 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 SP100P23497 879 aaPredicted RBP13.42□□□□□ -0.26
LITAF-221ENST00000622633 KLHL30Q0D2K2 578 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 KIAA0753Q2KHM9 967 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 CDC42EP5Q6NZY7 148 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 RUBCNQ92622 972 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 ZIM3Q96PE6 472 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 C5orf60A6NFR6 353 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 ZSCAN5CA6NGD5 496 aaPredicted RBP13.42□□□□□ -0.26
LITAF-221ENST00000622633 MEIS1O00470 390 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 CASP5P51878 434 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 EPHB4P54760 987 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 SNAP25P60880 206 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 PSMC6P62333 389 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 NFIAQ12857 509 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 SLC18A3Q16572 532 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 GBP7Q8N8V2 638 aaPredicted RBP13.42□□□□□ -0.26
LITAF-221ENST00000622633 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
LITAF-221ENST00000622633 ESYT3A0FGR9 886 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 CETN3O15182 167 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 HSF2BPO75031 334 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 KRT38O76015 456 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 EPS15P42566 896 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 CARSP49589 748 aaKnown RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 MARSP56192 900 aaKnown RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 ASIC2Q16515 512 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 TRIM68Q6AZZ1 485 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 EMBQ6PCB8 327 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 NCCRP1Q6ZVX7 275 aaPredicted RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 TBC1D1Q86TI0 1168 aaPredicted RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 CACNA2D3Q8IZS8 1091 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 GANQ9H2C0 597 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 EPB41L5Q9HCM4 733 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 USP21Q9UK80 565 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 FAM153BP0C7A2 387 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 SLC9A1P19634 815 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 GUCY2DQ02846 1103 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 FAM153CQ494X1 144 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 DNAAF5Q86Y56 855 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 FGD4Q96M96 766 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 COA1Q9GZY4 146 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 DHX36Q9H2U1 1008 aaKnown RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 FAM153AQ9UHL3 310 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
LITAF-221ENST00000622633 NFU1Q9UMS0 254 aa13.41□□□□□ -0.26
LITAF-221ENST00000622633 TMCC1O94876 653 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 HLA-DOAP06340 250 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 NR2F2P24468 414 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 USP11P51784 963 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 USP46P62068 366 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 GLE1Q53GS7 698 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 PRR16Q569H4 304 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 MEI1Q5TIA1 1274 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 OR52E8Q6IFG1 317 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 DYDC1Q8WWB3 177 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 KRT12Q99456 494 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 ZC3H12CQ9C0D7 883 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.4□□□□□ -0.26
LITAF-221ENST00000622633 HDAC9Q9UKV0 1011 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 SLC12A4Q9UP95 1085 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 GRID2IPA4D2P6 1211 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 MYH7BA7E2Y1 1941 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 HEXIM1O94992 359 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 ADRA2BP18089 450 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 RFC5P40937 340 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 TRPC1P48995 793 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms