RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 LONRF1Q17RB8 773 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 ZDHHC24Q6UX98 284 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 STK33Q9BYT3 514 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 FAM129AQ9BZQ8 928 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 GPR88Q9GZN0 384 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 SWAP70Q9UH65 585 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 NENFQ9UMX5 172 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
NPHP4-211ENST00000622020 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
NPHP4-211ENST00000622020 PPATQ06203 517 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 HOOK3Q86VS8 718 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 FAM178BQ8IXR5 827 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 ZSWIM2Q8NEG5 633 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 DYDC1Q8WWB3 177 aa17.03■□□□□ 0.32
NPHP4-211ENST00000622020 SERPINB2P05120 415 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 TMEM253P0C7T8 217 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 SCP2P22307 547 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 VPS41P49754 854 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 MAPK7Q13164 816 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.32
NPHP4-211ENST00000622020 CCDC137Q6PK04 289 aaKnown RBP17.02■□□□□ 0.32
NPHP4-211ENST00000622020 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 ANKRD42Q8N9B4 389 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 TLCD1Q96CP7 247 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 SUFUQ9UMX1 484 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 FRMD4BQ9Y2L6 1034 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 L3MBTL1Q9Y468 752 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 CCT8L1PA6NM43 557 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 F5H6K3 240 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 CALCAP01258 141 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 GCLMP48507 274 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 MMP14P50281 582 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 ACCSLQ4AC99 568 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 PRELID2Q8N945 189 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 EIF1ADQ8N9N8 165 aaKnown RBP17.02■□□□□ 0.32
NPHP4-211ENST00000622020 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.32
NPHP4-211ENST00000622020 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
NPHP4-211ENST00000622020 RPTORQ8N122 1335 aa17.02■□□□□ 0.31
NPHP4-211ENST00000622020 A0A0A6YYK5 440 aaPredicted RBP17.02■□□□□ 0.31
NPHP4-211ENST00000622020 MYL7Q01449 175 aa17.02■□□□□ 0.31
NPHP4-211ENST00000622020 HS2ST1Q7LGA3 356 aa17.02■□□□□ 0.31
NPHP4-211ENST00000622020 NGLY1Q96IV0 654 aa17.02■□□□□ 0.31
NPHP4-211ENST00000622020 COL16A1Q07092 1604 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 BHMG1C9JSJ3 638 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 PYGMP11217 842 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 COMTP21964 271 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 NEDD9Q14511 834 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ZKSCAN8Q15776 578 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ANKS4BQ8N8V4 417 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 SEC14L1Q92503 715 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 BORCS6Q96GS4 357 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ZC3H12CQ9C0D7 883 aaKnown RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 APEX2Q9UBZ4 518 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 CEP83Q9Y592 693 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 C5orf60A6NFR6 353 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 SLITRK3O94933 977 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 VCAM1P19320 739 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ICA1Q05084 483 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 GDAP1Q8TB36 358 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 PWWP2AQ96N64 755 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 ZNF317Q96PQ6 595 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-211ENST00000622020 FAM118BQ9BPY3 351 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 CARD9Q9H257 536 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 GRHL1Q9NZI5 618 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 SAMD15Q9P1V8 674 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 VAV3Q9UKW4 847 aa17.01■□□□□ 0.31
NPHP4-211ENST00000622020 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CCDC169A6NNP5 214 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CLSTN1O94985 981 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 EYA4O95677 639 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CYP3A7P24462 503 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CDC25CP30307 473 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 PLCB4Q15147 1175 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 KIF2BQ8N4N8 673 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 KCNK9Q9NPC2 374 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 TBK1Q9UHD2 729 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 GGA2Q9UJY4 613 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CDK5RAP2Q96SN8 1893 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 EIF3BP55884 814 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms