RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 SEC23AQ15436 765 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 PIK3AP1Q6ZUJ8 805 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 SUPT20HQ8NEM7 779 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 PRKAG3Q9UGI9 489 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 GGT7Q9UJ14 662 aa11.16□□□□□ -0.62
VPS11-207ENST00000620429 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
VPS11-207ENST00000620429 GNPATO15228 680 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 P4HA2O15460 535 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 CAPN15O75808 1086 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 TRPC1P48995 793 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 DNM2P50570 870 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 PPP2R5BQ15173 497 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 TMEM53Q6P2H8 277 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 C16orf87Q6PH81 154 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 TMC3Q7Z5M5 1100 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 SCUBE1Q8IWY4 988 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 ADSSL1Q8N142 457 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 ESR2Q92731 530 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 INPP5DQ92835 1189 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 HAUS1Q96CS2 278 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 COL1A1P02452 1464 aaPredicted RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 PABPC4LP0CB38 370 aaKnown RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 PORP16435 677 aaPredicted RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 CYP7A1P22680 504 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 FUT2Q10981 343 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 GPR162Q16538 588 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 IL17AQ16552 155 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 SYDE2Q5VT97 1194 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 CCDC65Q8IXS2 484 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 STAG2Q8N3U4 1231 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 TNFRSF25Q93038 417 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 INPP4AQ96PE3 977 aaPredicted RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 DDX43Q9NXZ2 648 aaKnown RBP11.15□□□□□ -0.62
VPS11-207ENST00000620429 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.62
VPS11-207ENST00000620429 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 hCG_2014768A0A024R1R8 64 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 LYNP07948 512 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 KLK7P49862 253 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 CDK7P50613 346 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 RASSF7Q02833 373 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 NPY5RQ15761 445 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 ZC2HC1CQ53FD0 456 aaPredicted RBP11.15□□□□□ -0.63
VPS11-207ENST00000620429 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.63
VPS11-207ENST00000620429 TCERG1LQ5VWI1 586 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 RNF43Q68DV7 783 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.63
VPS11-207ENST00000620429 DEPTORQ8TB45 409 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 LRRC8CQ8TDW0 803 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 NAT14Q8WUY8 206 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 CTNNBL1Q8WYA6 563 aaPredicted RBP11.15□□□□□ -0.63
VPS11-207ENST00000620429 TUBGCP5Q96RT8 1024 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 EXOC1Q9NV70 894 aa11.15□□□□□ -0.63
VPS11-207ENST00000620429 PSMA7O14818 248 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 SRGNP10124 158 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 HNRNPH3P31942 346 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 MTTPP55157 894 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 ADARP55265 1226 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 SF3A3Q12874 501 aaKnown RBP eCLIP11.14□□□□□ -0.635e-6■■■■□ 19.6
VPS11-207ENST00000620429 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 CFAP157Q5JU67 520 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 C3orf62Q6ZUJ4 267 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 NANOGNBQ7Z5D8 188 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 ZC3H18Q86VM9 953 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 SCG3Q8WXD2 468 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 SNX27Q96L92 541 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 NAP1L3Q99457 506 aaPredicted RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 TUBGCP2Q9BSJ2 902 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 NEUROG2Q9H2A3 272 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 JAG2Q9Y219 1238 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 ARAP2Q8WZ64 1704 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 CYP2D7A0A087X1C5 515 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 A0A1W2PQJ5 194 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 NUDT17P0C025 328 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 VAV1P15498 845 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 GEMIN4P57678 1058 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 RTP1P59025 263 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 EVX2Q03828 476 aa11.14□□□□□ -0.63
VPS11-207ENST00000620429 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
VPS11-207ENST00000620429 BCL2A1Q16548 175 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms