RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 XRN1Q8IZH2 1706 aaKnown RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 EIF3DO15371 548 aaKnown RBP eCLIP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 MSH4O15457 936 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 LDHAP00338 332 aaKnown RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 YWHAGP61981 247 aaKnown RBP eCLIP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 FUT2Q10981 343 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 BSPRYQ5W0U4 402 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 RFX6Q8HWS3 928 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 ZIM3Q96PE6 472 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 RAB3IPQ96QF0 476 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 ZNF446Q9NWS9 450 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 DMGDHQ9UI17 866 aaKnown RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 NAGPAQ9UK23 515 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 HSPA1LP34931 641 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 MOXD1Q6UVY6 613 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 EEPD1Q7L9B9 569 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 SPATA20Q8TB22 786 aa14.91□□□□□ -0.02
CNOT3-210ENST00000618939 NSUN6Q8TEA1 469 aaKnown RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 POLR3CQ9BUI4 534 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 ZNF277Q9NRM2 450 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-210ENST00000618939 CYP26A1O43174 497 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 SPP2Q13103 211 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 ZNF772Q68DY9 489 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 SNRNP48Q6IEG0 339 aaKnown RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 MAP7D3Q8IWC1 876 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 ELAC2Q9BQ52 826 aaKnown RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 COMMD10Q9Y6G5 202 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 WNT7AO00755 349 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 EIF3HO15372 352 aaKnown RBP eCLIP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 FAM133BQ5BKY9 247 aaKnown RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 NUGGCQ68CJ6 796 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 HAUS1Q96CS2 278 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 KLHL29Q96CT2 875 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 HSPBP1Q9NZL4 362 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 RSPH10B2B2RC85 870 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 SASH3O75995 380 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 RSPH10BP0C881 870 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 YWHABP31946 246 aaKnown RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 KCTD2Q14681 263 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 HIBCHQ6NVY1 386 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-210ENST00000618939 TMEM270Q6UE05 265 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 GDAP1Q8TB36 358 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 SCFD1Q8WVM8 642 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 VCPKMTQ9H867 229 aa14.9□□□□□ -0.02
CNOT3-210ENST00000618939 RTN2O75298 545 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 OSTNP61366 133 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 EVX2Q03828 476 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 TSNAXIP1Q2TAA8 658 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SWSAP1Q6NVH7 229 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 GJB7Q6PEY0 223 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 LMNTD2Q8IXW0 634 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 PROCA1Q8NCQ7 364 aaPredicted RBP14.89□□□□□ -0.03
CNOT3-210ENST00000618939 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 RUSC1Q9BVN2 902 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 BLOC1S4Q9NUP1 217 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 A0A0U1RQJ8 604 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 IRAK1P51617 712 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 MUM1L1Q5H9M0 696 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 RINT1Q6NUQ1 792 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SCARA5Q6ZMJ2 495 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 INHBAP08476 426 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 TMEM253P0C7T8 217 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SRGAP2CP0DJJ0 459 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 MEA1Q16626 185 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SUPT20HL1Q3ZLR7 823 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 NUDT12Q9BQG2 462 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 CALN1Q9BXU9 219 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 PCDHA10Q9Y5I2 948 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 GGPS1O95749 300 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SARNPP82979 210 aaKnown RBP14.89□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF394Q53GI3 561 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 DDX42Q86XP3 938 aaKnown RBP eCLIP14.89□□□□□ -0.03
CNOT3-210ENST00000618939 TRIM59Q8IWR1 403 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 RNF34Q969K3 372 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 TBC1D31Q96DN5 1066 aa14.89□□□□□ -0.03
CNOT3-210ENST00000618939 PON1P27169 355 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 MDH1P40925 334 aaKnown RBP14.88□□□□□ -0.03
CNOT3-210ENST00000618939 IL17AQ16552 155 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 KIAA1755Q5JYT7 1200 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 ATP2A3Q93084 1043 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 RILPQ96NA2 401 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 MCF2LO15068 1137 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 RXRBP28702 533 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 HDLBPQ00341 1268 aaKnown RBP14.88□□□□□ -0.03
CNOT3-210ENST00000618939 GIT2Q14161 759 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 SURF1Q15526 300 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
CNOT3-210ENST00000618939 MMS22LQ6ZRQ5 1243 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 ERICH1Q86X53 443 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 CLDN3O15551 220 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 MED7O43513 233 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 TMEM35BQ8NCS4 154 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 RIT2Q99578 217 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 PACSIN1Q9BY11 444 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms