RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZBTB42B2RXF5 422 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 C22orf31O95567 290 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 EPCAMP16422 314 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 ATP4AP20648 1035 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 CDC27P30260 824 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 CIITAP33076 1130 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 USP11P51784 963 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 AKAP17AQ02040 695 aaKnown RBP9.62□□□□□ -0.87
GPC6-202ENST00000617456 NTRK3Q16288 839 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 ATAT1Q5SQI0 421 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 GALNT17Q6IS24 598 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 RUFY3Q7L099 469 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 ECHDC2Q86YB7 292 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 SLC39A11Q8N1S5 342 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 FEZF2Q8TBJ5 459 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 AUTS2Q8WXX7 1259 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 BRF1Q92994 677 aa9.62□□□□□ -0.87
GPC6-202ENST00000617456 ZNF274Q96GC6 653 aaPredicted RBP9.62□□□□□ -0.87
GPC6-202ENST00000617456 JAKMIP1Q96N16 626 aaKnown RBP9.62□□□□□ -0.87
GPC6-202ENST00000617456 DMDP11532 3685 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 PI15O43692 258 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 NRDCO43847 1150 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 FGFR4P22455 802 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 CLCN5P51795 746 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 BCAR1P56945 870 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 NLRP11P59045 1033 aaKnown RBP9.61□□□□□ -0.87
GPC6-202ENST00000617456 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
GPC6-202ENST00000617456 CWF19L1Q69YN2 538 aaKnown RBP9.61□□□□□ -0.87
GPC6-202ENST00000617456 KIAA1841Q6NSI8 718 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
GPC6-202ENST00000617456 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 ERMP1Q7Z2K6 904 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 PLA2G4DQ86XP0 818 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 ZDHHC14Q8IZN3 488 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 REXO1Q8N1G1 1221 aaKnown RBP9.61□□□□□ -0.87
GPC6-202ENST00000617456 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 DZANK1Q9NVP4 752 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 TCEAL9Q9UHQ7 104 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 FBXL21Q9UKT6 434 aa9.61□□□□□ -0.87
GPC6-202ENST00000617456 IGLV3-22A0A075B6J6 115 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 IPO5O00410 1097 aaKnown RBP9.6□□□□□ -0.87
GPC6-202ENST00000617456 STK25O00506 426 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 DHX15O43143 795 aaKnown RBP9.6□□□□□ -0.87
GPC6-202ENST00000617456 ZC3H11AO75152 810 aaKnown RBP eCLIP9.6□□□□□ -0.87
GPC6-202ENST00000617456 EOMESO95936 686 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 PDIA3P30101 505 aaKnown RBP9.6□□□□□ -0.87
GPC6-202ENST00000617456 ALDH7A1P49419 539 aaKnown RBP9.6□□□□□ -0.87
GPC6-202ENST00000617456 ANGPT1Q15389 498 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 JAKMIP3Q5VZ66 844 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 EFCAB12Q6NXP0 572 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 CPLX2Q6PUV4 134 aaKnown RBP9.6□□□□□ -0.87
GPC6-202ENST00000617456 CABP7Q86V35 215 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 TRIM22Q8IYM9 498 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 SIX5Q8N196 739 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 LRRC71Q8N4P6 559 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 DTWD2Q8NBA8 298 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
GPC6-202ENST00000617456 CYP26B1Q9NR63 512 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 GABBR1Q9UBS5 961 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 CYP46A1Q9Y6A2 500 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 NCOR2Q9Y618 2525 aa9.6□□□□□ -0.87
GPC6-202ENST00000617456 FAM86B1E9PN63 330 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 MAGEB2O15479 319 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 CSDE1O75534 798 aaKnown RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 DEXIO95424 95 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 FAM86B2P0C5J1 330 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 NPR3P17342 541 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 AOC1P19801 751 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 RFX1P22670 979 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 EIF4BP23588 611 aaKnown RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 TMOD1P28289 359 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 CDC42EP1Q00587 391 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 MOXD1Q6UVY6 613 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 TMEM173Q86WV6 379 aaPredicted RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 CCDC105Q8IYK2 499 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 RDM1Q8NG50 284 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 SLC22A17Q8WUG5 538 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 ACSF2Q96CM8 615 aaPredicted RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 RIT2Q99578 217 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 MRPL9Q9BYD2 267 aaKnown RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 ZBP1Q9H171 429 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 CEP131Q9UPN4 1083 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 PCDHA10Q9Y5I2 948 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 DCHS1Q96JQ0 3298 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms