RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 PEX3P56589 373 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 DNAL1Q4LDG9 190 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 CYB5D1Q6P9G0 228 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ATL2Q8NHH9 583 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ERP27Q96DN0 273 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 E2F6O75461 281 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 SOX5P35711 763 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 NEK2P51955 445 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ARHGDIAP52565 204 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 WDR93Q6P2C0 686 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 STOX1Q6ZVD7 989 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 SYDE1Q6ZW31 735 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 PIGOQ8TEQ8 1089 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 TCP10L2B9ZVM9 353 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 LDHAP00338 332 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 FCER1AP12319 257 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ATICP31939 592 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 CNGA3Q16281 694 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ZNF746Q6NUN9 644 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 MIS18BP1Q6P0N0 1132 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 C4orf50Q6ZRC1 276 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 RSRC2Q7L4I2 434 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 C3orf20Q8ND61 904 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 RANBP17Q9H2T7 1088 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 LRRC4Q9HBW1 653 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 AGPAT5Q9NUQ2 364 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 STX18Q9P2W9 335 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 K7ERI5 159 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ABL1P00519 1130 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 GYPCP04921 128 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 MARK3P27448 753 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 PPP6R3Q5H9R7 873 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 FRMD5Q7Z6J6 570 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 EXOC8Q8IYI6 725 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 KIAA1586Q9HCI6 787 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 STRIP2Q9ULQ0 834 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 DPYDQ12882 1025 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 HEXIM2Q96MH2 286 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM20AQ96MK3 541 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 SLC13A1Q9BZW2 595 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM9Q9C026 710 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 SEL1LQ9UBV2 794 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 USP6P35125 1406 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 PPP1R12AO14974 1030 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 KRT7P08729 469 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 KDSRQ06136 332 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 CDO1Q16878 200 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 RYBPQ8N488 228 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ZBTB18Q99592 522 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 TRIM51Q9BSJ1 452 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 MSTO1Q9BUK6 570 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ROPN1BQ9BZX4 212 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ROPN1Q9HAT0 212 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
CLTCL1-209ENST00000617103 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 RAD51CO43502 376 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 MYBL1P10243 752 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 ITIH2P19823 946 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.63e-6■■■■■ 41.9
CLTCL1-209ENST00000617103 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 KDM7AQ6ZMT4 941 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 SCG3Q8WXD2 468 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 ASNSD1Q9NWL6 643 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 IP6K2Q9UHH9 426 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 MED14O60244 1454 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 ZNF18P17022 549 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 BRD2P25440 801 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 VAMP7P51809 220 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 APLFQ8IW19 511 aaPredicted RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 NIM1KQ8IY84 436 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 ALKBH8Q96BT7 664 aaKnown RBP11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 PNKPQ96T60 521 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 DLGAP2Q9P1A6 1054 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
CLTCL1-209ENST00000617103 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms