RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 SCFD1Q8WVM8 642 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 P2RX5Q93086 422 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 PRIMPOLQ96LW4 560 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 GCOM2Q9BZD3 368 aaPredicted RBP12.82□□□□□ -0.36
TARDBP-217ENST00000616545 DNAJC25Q9H1X3 360 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
TARDBP-217ENST00000616545 DENND3A2RUS2 1198 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 KIAA0391O15091 583 aaKnown RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 CRYBB1P53674 252 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 SOX10P56693 466 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 TPM4P67936 248 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 MYL5Q02045 173 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 RBL2Q08999 1139 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 DRP2Q13474 957 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 SNX17Q15036 470 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 ANKRD33Q7Z3H0 272 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 NOC3LQ8WTT2 800 aaKnown RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 SENP6Q9GZR1 1112 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 ADAMTS10Q9H324 1103 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 POLD4Q9HCU8 107 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 TYW1Q9NV66 732 aaKnown RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-217ENST00000616545 SQORQ9Y6N5 450 aa12.81□□□□□ -0.36
TARDBP-217ENST00000616545 MYH11P35749 1972 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 BECN2A8MW95 431 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 GPR32O75388 356 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 PIGRP01833 764 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 MYBP10242 640 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 PRKCSHP14314 528 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 CASP5P51878 434 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 MRPS6P82932 125 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 ZNF200P98182 395 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 FKBP3Q00688 224 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 HIC1Q14526 733 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 FAM26DQ5JW98 314 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SLFN12LQ6IEE8 588 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 NECAB2Q7Z6G3 386 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 C12orf56Q8IXR9 622 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SMYD4Q8IYR2 804 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SYCP3Q8IZU3 236 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 USP38Q8NB14 1042 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
TARDBP-217ENST00000616545 KCTD10Q9H3F6 313 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 FZD8Q9H461 694 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
TARDBP-217ENST00000616545 A0A087WZ62 844 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 ACKR2O00590 384 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 PARNO95453 639 aaKnown RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 CD4P01730 458 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 VTNP04004 478 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 EIF4BP23588 611 aaKnown RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 AXLP30530 894 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 BFSP2Q13515 415 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 IQCB1Q15051 598 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 UVSSAQ2YD98 709 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 ZCWPW2Q504Y3 356 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 ZC2HC1CQ53FD0 456 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 C11orf57Q6ZUT1 292 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 APBB1IPQ7Z5R6 666 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 SLC9A9Q8IVB4 645 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 CEP63Q96MT8 703 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 CTAGE1Q96RT6 745 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 FDXACB1Q9BRP7 624 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
TARDBP-217ENST00000616545 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 CTNND2Q9UQB3 1225 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
TARDBP-217ENST00000616545 TRPV2Q9Y5S1 764 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms