RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 VN1R3Q9BXE9 311 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 EVPLQ92817 2033 aa19.81■□□□□ 0.76
TRAPPC3-209ENST00000616395 FGFR4P22455 802 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 EXOSC10Q01780 885 aaKnown RBP19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 CUL4AQ13619 759 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 MIS18BP1Q6P0N0 1132 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 BBXQ8WY36 941 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 EMILIN2Q9BXX0 1053 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 NRDE2Q9H7Z3 1164 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 ARHGEF3Q9NR81 526 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 NCDNQ9UBB6 729 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 C2orf16Q68DN1 1984 aa19.8■□□□□ 0.76
TRAPPC3-209ENST00000616395 MEIS1O00470 390 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 GALTP07902 379 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 CNPP09543 421 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 GLULP15104 373 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 SDHBP21912 280 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 LIFRP42702 1097 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 GNAQP50148 359 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 VARS2Q5ST30 1063 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 KIAA0319Q5VV43 1072 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 FANCMQ8IYD8 2048 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 MYADMQ96S97 322 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 MTA3Q9BTC8 594 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 FOXQ1Q9C009 403 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 WDR6Q9NNW5 1121 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 EPS15L1Q9UBC2 864 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 BRPF3Q9ULD4 1205 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 SLC12A7Q9Y666 1083 aa19.79■□□□□ 0.76
TRAPPC3-209ENST00000616395 LRRN2O75325 713 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 SSBP05455 408 aaKnown RBP eCLIP19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 DARSP14868 501 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 LONRF3Q496Y0 759 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 EFCAB12Q6NXP0 572 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 HEATR3Q7Z4Q2 680 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 LRRC71Q8N4P6 559 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 LINC01465Q8N7H1 131 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 CMASQ8NFW8 434 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 LPPQ93052 612 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 MAP7D2Q96T17 732 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 TBC1D13Q9NVG8 400 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 DACT1Q9NYF0 836 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 DNAJB4Q9UDY4 337 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 KIF3AQ9Y496 699 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 CFAP47Q6ZTR5 3102 aa19.78■□□□□ 0.76
TRAPPC3-209ENST00000616395 CCDC195A0A1B0GUA6 201 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 MAGEB2O15479 319 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 DHX15O43143 795 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 PTMSP20962 102 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 SLC11A1P49279 550 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 DCLRE1AQ6PJP8 1040 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 APOA5Q6Q788 366 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 SGMS1Q86VZ5 419 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 CCDC82Q8N4S0 544 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 PJA1Q8NG27 643 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 STAMQ92783 540 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 NXPE3Q969Y0 559 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 GBP4Q96PP9 640 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 MAN1C1Q9NR34 630 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 FOXD4L1Q9NU39 408 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 CDV3Q9UKY7 258 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 SMC3Q9UQE7 1217 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 MAFBQ9Y5Q3 323 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 CLUHO75153 1309 aa19.77■□□□□ 0.76
TRAPPC3-209ENST00000616395 DCDC2BA2VCK2 349 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 CARNS1A5YM72 827 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 CSDE1O75534 798 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 TMOD1P28289 359 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 Q6ZUG5 572 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 SCLT1Q96NL6 688 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 ANO3Q9BYT9 981 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 GBP3Q9H0R5 595 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 CEP131Q9UPN4 1083 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 INPP5FQ9Y2H2 1132 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 GPR179Q6PRD1 2367 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 KLF18A0A0U1RQI7 1052 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 MEIS3P2A8K0S8 358 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 B4GALT3O60512 393 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 LILRB3O75022 631 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 MYBP10242 640 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF76P36508 570 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 PHKA2P46019 1235 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 GPC3P51654 580 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 RNASELQ05823 741 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 NOMO2Q5JPE7 1267 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 GLB1LQ6UWU2 654 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 TMTC2Q8N394 836 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 GPR161Q8N6U8 529 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 ST13P5Q8NFI4 369 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 RSPH1Q8WYR4 309 aa19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-209ENST00000616395 SPTLC1O15269 473 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 INPPL1O15357 1258 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 LMNB2Q03252 620 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF528Q3MIS6 628 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 TMTC3Q6ZXV5 915 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 NIPA1Q7RTP0 329 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF280BQ86YH2 543 aa19.75■□□□□ 0.75
TRAPPC3-209ENST00000616395 ZNF710Q8N1W2 664 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms