RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SARM1Q6SZW1 724 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 SLFN12Q8IYM2 578 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 SNX29Q8TEQ0 813 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 PLIN2Q99541 437 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 C11orf84Q9BUA3 381 aaPredicted RBP11.92□□□□□ -0.5
COL4A1-205ENST00000615732 KCNH7Q9NS40 1196 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 FAM50BQ9Y247 325 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
COL4A1-205ENST00000615732 KDM3AQ9Y4C1 1321 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 CYP3A7-CYP3A51PA0A087WV96 503 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 ENPP3O14638 875 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 AP5Z1O43299 807 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 TBX10O75333 385 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 MYL1P05976 194 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 ARP10275 920 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 CYP3A7P24462 503 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 MSNP26038 577 aaKnown RBP11.91□□□□□ -0.5
COL4A1-205ENST00000615732 BMPR1AP36894 532 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 ACTR2P61160 394 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 AMPD3Q01432 767 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
COL4A1-205ENST00000615732 HFE2Q6ZVN8 426 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 STAMQ92783 540 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 TTC12Q9H892 705 aaPredicted RBP11.91□□□□□ -0.5
COL4A1-205ENST00000615732 STK17AQ9UEE5 414 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 TRPV2Q9Y5S1 764 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 MRPL42Q9Y6G3 142 aaKnown RBP11.91□□□□□ -0.5
COL4A1-205ENST00000615732 ZNF318Q5VUA4 2279 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
COL4A1-205ENST00000615732 POTEMA6NI47 508 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 M0QZ92 97 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 TBX3O15119 743 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 LINC01565O15544 149 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 MBTPS2O43462 519 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 SLC26A4O43511 780 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 EDIL3O43854 480 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 RB1P06400 928 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 CASP1P29466 404 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 CDC25BP30305 580 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 PAK2Q13177 524 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 CUL4BQ13620 913 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 PDIA5Q14554 519 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 SMAD2Q15796 467 aaKnown RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 Q4G0T1 1027 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 PRR16Q569H4 304 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 PLA2G4DQ86XP0 818 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 SPC24Q8NBT2 197 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 ERMNQ8TAM6 284 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 SPATA20Q8TB22 786 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 CLP1Q92989 425 aaKnown RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 ZNF689Q96CS4 500 aaPredicted RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 MBOAT7Q96N66 472 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 LMAN2LQ9H0V9 348 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 IGFLR1Q9H665 355 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 AGO4Q9HCK5 861 aaKnown RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 ALG13Q9NP73 1137 aaKnown RBP11.9□□□□□ -0.5
COL4A1-205ENST00000615732 MUTYHQ9UIF7 546 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 GINS2Q9Y248 185 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 RWDD3Q9Y3V2 267 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
COL4A1-205ENST00000615732 ESPNB1AK53 854 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 BACH1O14867 736 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 NCK2O43639 380 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 DGKIO75912 1065 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CCNE2O96020 404 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CYP3A4P08684 503 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 ERCC5P28715 1186 aaPredicted RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CIITAP33076 1130 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CCT6AP40227 531 aaKnown RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 STAT5BP51692 787 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 ASIC1P78348 528 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CAMK1Q14012 370 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 KLHL10Q6JEL2 608 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 RTN4RL1Q86UN2 441 aaPredicted RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 HAS1Q92839 578 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 GTPBP4Q9BZE4 634 aaKnown RBP11.89□□□□□ -0.51
COL4A1-205ENST00000615732 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 PADI3Q9ULW8 664 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 PCDHGC5Q9Y5F6 944 aa11.89□□□□□ -0.51
COL4A1-205ENST00000615732 NFASCO94856 1347 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 IGSF9BQ9UPX0 1349 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 MGEA5O60502 916 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms