RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 DDNO94850 711 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 SYT10Q6XYQ8 523 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ARHGAP24Q8N264 748 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 MED15Q96RN5 788 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 EMILIN2Q9BXX0 1053 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 IRAK4Q9NWZ3 460 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 GPRC5DQ9NZD1 345 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 CEP72Q9P209 647 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 A8MXQ7 604 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 H3BRJ5 948 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 HIP1RO75146 1068 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 TERF1P54274 439 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 NR5A1Q13285 461 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM199Q8N511 208 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 TBC1D19Q8N5T2 526 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ATG4CQ96DT6 458 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 IFT43Q96FT9 208 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM213AQ9BRX8 229 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 IDI2Q9BXS1 227 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 FRMD5Q7Z6J6 570 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ITIH5Q86UX2 942 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 CYP26B1Q9NR63 512 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 SAR1BQ9Y6B6 198 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 PRRG1O14668 218 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 CD58P19256 250 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ERCC3P19447 782 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 PSMA2P25787 234 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 GRIK1P39086 918 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 PCNX4Q63HM2 1172 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 SCARA5Q6ZMJ2 495 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZNF148Q9UQR1 794 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 IGSF9BQ9UPX0 1349 aa10.44□□□□□ -0.74
TNFRSF9-204ENST00000615230 PDXKO00764 312 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 PIGOQ8TEQ8 1089 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SKA2Q8WVK7 121 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 WDR35Q9P2L0 1181 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SH3BP1Q9Y3L3 701 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 UNCXA6NJT0 531 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TBC1D12O60347 775 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SEC24BO95487 1268 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TPD52P55327 224 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM132BQ14DG7 1078 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 DARS2Q6PI48 645 aaKnown RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 MMTAG2Q9BU76 263 aaKnown RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 LMBRD1Q9NUN5 540 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZNF212Q9UDV6 495 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 IP6K2Q9UHH9 426 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 CPP00450 1065 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 PAPOLAP51003 745 aaKnown RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZBED6P86452 979 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 APBA1Q02410 837 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 ENTPD7Q9NQZ7 604 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TJP2Q9UDY2 1190 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 IQSEC1Q6DN90 963 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TTC23LQ6PF05 361 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 NIPA1Q7RTP0 329 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TTC30AQ86WT1 665 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM76AQ8TAV0 307 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 UCMAQ8WVF2 138 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM169Q96HH4 297 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 PRMT6Q96LA8 375 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 RTFDC1Q9BY42 306 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 EVA1BQ9NVM1 165 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TMEM260Q9NX78 707 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 UBQLN1Q9UMX0 589 aaKnown RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 GOLGA8SH3BPF8 625 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 M0QYV0 167 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SGK1O00141 431 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 KCNK3O14649 394 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 NMT2O60551 498 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TJP3O95049 919 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 ATP2C1P98194 919 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 PRKCEQ02156 737 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SGSM1Q2NKQ1 1148 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SIRT2Q8IXJ6 389 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 SCYL1Q96KG9 808 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 TRIM17Q9Y577 477 aa10.43□□□□□ -0.74
TNFRSF9-204ENST00000615230 ZNF142P52746 1687 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KRT3P12035 628 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SDC4P31431 198 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 SERPINB6P35237 376 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 EFCAB12Q6NXP0 572 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 PXDNQ92626 1479 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 KIF13AQ9H1H9 1805 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 URODP06132 367 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 CYP27A1Q02318 531 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 GTF2H3Q13889 308 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 LRRC41Q15345 812 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 ATF7IP2Q5U623 682 aa10.42□□□□□ -0.74
TNFRSF9-204ENST00000615230 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms