RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
PRKN-211ENST00000615065 SLC39A11Q8N1S5 342 aa16.56■□□□□ 0.24
PRKN-211ENST00000615065 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 PSPC1Q8WXF1 523 aaKnown RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 CDCA3Q99618 268 aaPredicted RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 ZSWIM4Q9H7M6 989 aa16.56■□□□□ 0.24
PRKN-211ENST00000615065 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
PRKN-211ENST00000615065 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
PRKN-211ENST00000615065 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
PRKN-211ENST00000615065 NT5C1B-RDH14C9J2C7 533 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 DCXO43602 365 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 SLITRK3O94933 977 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 ALADP13716 330 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 BCAR1P56945 870 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 KRT17Q04695 432 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 TRIM29Q14134 588 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
PRKN-211ENST00000615065 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 PCDHA12Q9UN75 941 aa16.55■□□□□ 0.24
PRKN-211ENST00000615065 USP15Q9Y4E8 981 aaPredicted RBP16.55■□□□□ 0.24
PRKN-211ENST00000615065 GAS2O43903 313 aaKnown RBP16.54■□□□□ 0.24
PRKN-211ENST00000615065 NEMFO60524 1076 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 EIF5BO60841 1220 aaKnown RBP16.54■□□□□ 0.24
PRKN-211ENST00000615065 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRKN-211ENST00000615065 SKIP12755 728 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 RAB27AP51159 221 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 KCNC3Q14003 757 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 LLGL2Q6P1M3 1020 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 TMC7Q7Z402 723 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 RNF149Q8NC42 400 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 TCP11Q8WWU5 503 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 MTRQ99707 1265 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 TTC12Q9H892 705 aaPredicted RBP16.54■□□□□ 0.24
PRKN-211ENST00000615065 NGRNQ9NPE2 291 aaKnown RBP16.54■□□□□ 0.24
PRKN-211ENST00000615065 XPNPEP1Q9NQW7 623 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 INPP5FQ9Y2H2 1132 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 PCDHB2Q9Y5E7 798 aa16.54■□□□□ 0.24
PRKN-211ENST00000615065 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 ZNF623O75123 536 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
PRKN-211ENST00000615065 TXKP42681 527 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 ALDH7A1P49419 539 aaKnown RBP16.53■□□□□ 0.24
PRKN-211ENST00000615065 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 NOMO2Q5JPE7 1267 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 TMEM173Q86WV6 379 aaPredicted RBP16.53■□□□□ 0.24
PRKN-211ENST00000615065 HSD17B14Q9BPX1 270 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 TBC1D13Q9NVG8 400 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 MUTYHQ9UIF7 546 aa16.53■□□□□ 0.24
PRKN-211ENST00000615065 PRR33A8MZF0 331 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 B4GALT3O60512 393 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 OFD1O75665 1012 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 LYPLA2O95372 231 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 TECP42680 631 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.24
PRKN-211ENST00000615065 UBXN11Q5T124 520 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 TMEM184AQ6ZMB5 413 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 RNF135Q8IUD6 432 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 SUSD6Q92537 303 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 MTMR9Q96QG7 549 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 HCN4Q9Y3Q4 1203 aa16.52■□□□□ 0.24
PRKN-211ENST00000615065 A0A087WWV3 80 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 POTEMA6NI47 508 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 ASAP2O43150 1006 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 SRGAP2BP0DMP2 458 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 MCM7P33993 719 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
PRKN-211ENST00000615065 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 MRPL43Q8N983 215 aaKnown RBP16.51■□□□□ 0.23
PRKN-211ENST00000615065 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
PRKN-211ENST00000615065 RSPH1Q8WYR4 309 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 TMEM169Q96HH4 297 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 ANKEF1Q9NU02 776 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
PRKN-211ENST00000615065 TRIOO75962 3097 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 LOC730098B7Z3J9 87 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 ERLIN2O94905 339 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 GALTP07902 379 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 CA8P35219 290 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 PLA2G5P39877 138 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 RARRES1P49788 294 aa16.5■□□□□ 0.23
PRKN-211ENST00000615065 AFF1P51825 1210 aaKnown RBP16.5■□□□□ 0.23
PRKN-211ENST00000615065 PTENP60484 403 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms