RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 UBXN11Q5T124 520 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 IFNLR1Q8IU57 520 aaPredicted RBP17.41■□□□□ 0.38
PDCD6-212ENST00000614778 LPPQ93052 612 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 MRPL38Q96DV4 380 aaKnown RBP17.41■□□□□ 0.38
PDCD6-212ENST00000614778 TMEM117Q9H0C3 514 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 CWH43Q9H720 699 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 ALG13Q9NP73 1137 aaKnown RBP17.41■□□□□ 0.38
PDCD6-212ENST00000614778 FAM105AQ9NUU6 356 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
PDCD6-212ENST00000614778 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
PDCD6-212ENST00000614778 CUL9Q8IWT3 2517 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 TSPAN1O60635 241 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 EOMESO95936 686 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 DNAJB1P25685 340 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 GRIN1Q05586 938 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 POU5F1BQ06416 359 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 CAMK1Q14012 370 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 TFDP1Q14186 410 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
PDCD6-212ENST00000614778 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
PDCD6-212ENST00000614778 AMHR2Q16671 573 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
PDCD6-212ENST00000614778 KLHL23Q8NBE8 558 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 MCPH1Q8NEM0 835 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 HELQQ8TDG4 1101 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 C11orf84Q9BUA3 381 aaPredicted RBP17.4■□□□□ 0.38
PDCD6-212ENST00000614778 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
PDCD6-212ENST00000614778 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 CSPG5O95196 566 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 ITGB1P05556 798 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 ZRSR1Q15695 479 aaKnown RBP17.39■□□□□ 0.37
PDCD6-212ENST00000614778 CPB2Q96IY4 423 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 PLIN2Q99541 437 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 PLVAPQ9BX97 442 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 PCDHB2Q9Y5E7 798 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 CLIC4Q9Y696 253 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
PDCD6-212ENST00000614778 LRRIQ4A6NIV6 560 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 B4GALT5O43286 388 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 HOXA2O43364 376 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 ZNF623O75123 536 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 EYA4O95677 639 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 TFF2Q03403 129 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 PTPROQ16827 1216 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 HYIQ5T013 277 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
PDCD6-212ENST00000614778 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 SPPL3Q8TCT6 385 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 LRRC15Q8TF66 581 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 P2RX5Q93086 422 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 RUSC1Q9BVN2 902 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
PDCD6-212ENST00000614778 TTC28Q96AY4 2481 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 TTLL13PA6NNM8 815 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 STX6O43752 255 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 ERLIN2O94905 339 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 ARF4P18085 180 aaPredicted RBP17.37■□□□□ 0.37
PDCD6-212ENST00000614778 PBX3P40426 434 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 PTPAQ15257 358 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 CDCA2Q69YH5 1023 aaPredicted RBP17.37■□□□□ 0.37
PDCD6-212ENST00000614778 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 MRPL10Q7Z7H8 261 aaKnown RBP17.37■□□□□ 0.37
PDCD6-212ENST00000614778 CDR2LQ86X02 465 aaPredicted RBP17.37■□□□□ 0.37
PDCD6-212ENST00000614778 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 ABI1Q8IZP0 508 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 DAW1Q8N136 415 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 KIFC3Q9BVG8 833 aa17.37■□□□□ 0.37
PDCD6-212ENST00000614778 EIF2AQ9BY44 585 aaKnown RBP17.37■□□□□ 0.37
PDCD6-212ENST00000614778 OFD1O75665 1012 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 EDN1P05305 212 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 RAB27AP51159 221 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 AFF1P51825 1210 aaKnown RBP17.36■□□□□ 0.37
PDCD6-212ENST00000614778 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 NAALADL2Q58DX5 795 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 CABP7Q86V35 215 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 SMG8Q8ND04 991 aaKnown RBP17.36■□□□□ 0.37
PDCD6-212ENST00000614778 LMAN2LQ9H0V9 348 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 PCDHGC5Q9Y5F6 944 aa17.36■□□□□ 0.37
PDCD6-212ENST00000614778 B4GALT3O60512 393 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 FGF18O76093 207 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 BMP15O95972 392 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 SKIP12755 728 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 IRS1P35568 1242 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 MAPK7Q13164 816 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 PCBP1Q15365 356 aaKnown RBP eCLIP17.35■□□□□ 0.376e-8■■■■■ 46.6
PDCD6-212ENST00000614778 TIGD5Q53EQ6 642 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 RINT1Q6NUQ1 792 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 NOTUMQ6P988 496 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 C1orf186Q6ZWK4 172 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 POF1BQ8WVV4 589 aa17.35■□□□□ 0.37
PDCD6-212ENST00000614778 ATXN2LQ8WWM7 1075 aaKnown RBP17.35■□□□□ 0.37
PDCD6-212ENST00000614778 CCDC113Q9H0I3 377 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms