RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 XXYLT1Q8NBI6 393 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SLC7A3Q8WY07 619 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SEPT1Q8WYJ6 367 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 MS4A4AQ96JQ5 239 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IFT74Q96LB3 600 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TCHPQ9BT92 498 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PI4K2AQ9BTU6 479 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TARS2Q9BW92 718 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 PLEKHA4Q9H4M7 779 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 AZI2Q9H6S1 392 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ATP6V0A4Q9HBG4 840 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 METTL14Q9HCE5 456 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 KCND1Q9NSA2 647 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 KCND2Q9NZV8 630 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CEP72Q9P209 647 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 SALL4Q9UJQ4 1053 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 DDX41Q9UJV9 622 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 FAM184BQ9ULE4 1060 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 PCDHA13Q9Y5I0 950 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 IVNS1ABPQ9Y6Y0 642 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 GOLGA6L9A6NEM1 432 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZNF185O15231 689 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NCK2O43639 380 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DGAT1O75907 488 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 LYPLA2O95372 231 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 SLC25A27O95847 323 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ATP1A1P05023 1023 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 MUTP22033 750 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 SSTR3P32745 418 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZNF157P51786 506 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 VAMP7P51809 220 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 KRT83P78385 493 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 MYL7Q01449 175 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PPP2R3AQ06190 1150 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TMEM132AQ24JP5 1023 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZBTB41Q5SVQ8 909 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TAF3Q5VWG9 929 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 HGSNATQ68CP4 663 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 SLC39A4Q6P5W5 647 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ARMCX2Q7L311 632 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TMEM130Q8N3G9 435 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 SAMD3Q8N6K7 520 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DEPTORQ8TB45 409 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PRPF31Q8WWY3 499 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 LENG1Q96BZ8 264 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 BORCS6Q96GS4 357 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NLRP4Q96MN2 994 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 GANQ9H2C0 597 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 RNPEPQ9H4A4 650 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TMEM206Q9H813 350 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 UBE2TQ9NPD8 197 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 SMARCAL1Q9NZC9 954 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DNAJC12Q9UKB3 198 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZHX1Q9UKY1 873 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 PACSIN2Q9UNF0 486 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 RLFQ13129 1914 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 A0A1W2PQJ5 194 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 CTAGE9A4FU28 777 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 EIF3CLB5ME19 914 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 K7ERI5 159 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 KRT86O43790 486 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 MYCNP04198 464 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 EDN1P05305 212 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZNF286BP0CG31 522 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 CETPP11597 493 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ABCB4P21439 1286 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 FECHP22830 423 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 GLRA2P23416 452 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 LIG4P49917 911 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 CLCN3P51790 818 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 MARSP56192 900 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 GTF2BQ00403 316 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NEDD9Q14511 834 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DRAP1Q14919 205 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 SNRNP35Q16560 246 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 PHLDB3Q6NSJ2 640 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TAS1R3Q7RTX0 852 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ZNF571Q7Z3V5 609 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 RHPN2Q8IUC4 686 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 ARHGEF19Q8IW93 802 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 TEX2Q8IWB9 1127 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PPM1KQ8N3J5 372 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 UBXN4Q92575 508 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 EIF3CQ99613 913 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 STRA6Q9BX79 667 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 INTS2Q9H0H0 1204 aaKnown RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 SIX2Q9NPC8 291 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NRBP2Q9NSY0 501 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 DMAC2Q9NW81 257 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 EHD2Q9NZN4 543 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 MAFBQ9Y5Q3 323 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 CAPN6Q9Y6Q1 641 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NFASCO94856 1347 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 PHLPP2Q6ZVD8 1323 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 SPDYE4A6NLX3 237 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 FOXN3O00409 490 aaPredicted RBP3.74□□□□□ -1.81
LIG4-205ENST00000614526 SERPING1P05155 500 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 RHOXF2BP0C7M4 288 aa3.74□□□□□ -1.81
LIG4-205ENST00000614526 NOP2P46087 812 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms