RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
SCAMP1-205ENST00000614488 C1QTNF3-AMACRE9PGA6 284 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 TOX4O94842 621 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 GAAP10253 952 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 NRG3P56975 720 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 PPARAQ07869 468 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 SAFB2Q14151 953 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 FSCN1Q16658 493 aaKnown RBP7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 PITRM1Q5JRX3 1037 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 IQSEC1Q6DN90 963 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 CCDC62Q6P9F0 684 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 LYSMD2Q8IV50 215 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 SLC41A1Q8IVJ1 513 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 GLB1L2Q8IW92 636 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 OR14C36Q8NHC7 312 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 EDAQ92838 391 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 UIMC1Q96RL1 719 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 GPHA2Q96T91 129 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 AGO3Q9H9G7 860 aaKnown RBP7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 PRSS50Q9UI38 385 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 MCM8Q9UJA3 840 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 TSC22D4Q9Y3Q8 395 aa7.01□□□□□ -1.29
SCAMP1-205ENST00000614488 A0A1W2PRX2 142 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 CLEC2LP0C7M8 214 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 ENPP1P22413 925 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 KIR2DL3P43628 341 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 R3HDM1Q15032 1099 aaKnown RBP7□□□□□ -1.29
SCAMP1-205ENST00000614488 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 ATL2Q8NHH9 583 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 FDXACB1Q9BRP7 624 aaPredicted RBP7□□□□□ -1.29
SCAMP1-205ENST00000614488 PLA2G3Q9NZ20 509 aa7□□□□□ -1.29
SCAMP1-205ENST00000614488 MUSKO15146 869 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 LY86O95711 162 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 TRIM25Q14258 630 aaKnown RBP6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 GRM7Q14831 915 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 CDSNQ15517 529 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 UGT8Q16880 541 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 KRT40Q6A162 431 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 ZNF585AQ6P3V2 769 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 LMBR1LQ6UX01 489 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 LHFPL2Q6ZUX7 228 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 PIK3C3Q8NEB9 887 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 FAM89AQ96GI7 184 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 RAX2Q96IS3 184 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 RPL10LQ96L21 214 aaKnown RBP6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 MPHOSPH9Q99550 1183 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 GPR20Q99678 358 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 FAM126AQ9BYI3 521 aaPredicted RBP6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 KCTD10Q9H3F6 313 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 IL23AQ9NPF7 189 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 TESMINQ9Y4I5 508 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 CDY2AQ9Y6F7 541 aa6.99□□□□□ -1.29
SCAMP1-205ENST00000614488 GOLGA8BA8MQT2 603 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 NRP1O14786 923 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 MSX2P35548 267 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 MEF2AQ02078 507 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 CD69Q07108 199 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 FOXL1Q12952 345 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 SPIDRQ14159 915 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 CT83Q5H943 113 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 MAMDC4Q6UXC1 1216 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 Q6ZSN1 163 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 GAREM2Q75VX8 874 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 LMBR1Q8WVP7 490 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 PAWRQ96IZ0 340 aaKnown RBP6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 ORAI2Q96SN7 254 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 EVLQ9UI08 416 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-205ENST00000614488 PHLDB1Q86UU1 1377 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 A0A1W2PR48 441 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 K7ESF4 209 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 PRKD3O94806 890 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 ACO1P21399 889 aaKnown RBP6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 MGAT5Q09328 741 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 ACAP1Q15027 740 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 TAS1R1Q7RTX1 841 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 NECAB2Q7Z6G3 386 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 AHCYL2Q96HN2 611 aaKnown RBP6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 PRDM12Q9H4Q4 367 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 VTA1Q9NP79 307 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 RCAN3Q9UKA8 241 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
SCAMP1-205ENST00000614488 ALDH1A2O94788 518 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 LPLP06858 475 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 LGALS4P56470 323 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 WNT3AP56704 352 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 PRKD1Q15139 912 aaPredicted RBP6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 DDX42Q86XP3 938 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 CMTM4Q8IZR5 234 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 D2HGDHQ8N465 521 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 EAF2Q96CJ1 260 aaPredicted RBP6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 TMEM176AQ96HP8 235 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 ADOQ96SZ5 270 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 TCF25Q9BQ70 676 aa6.96□□□□□ -1.3
SCAMP1-205ENST00000614488 ATP8A1Q9Y2Q0 1164 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms