RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FAM13AO94988 1023 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 F2P00734 622 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 RSPH10BP0C881 870 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 CYP2C9P11712 490 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-212ENST00000613856 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-212ENST00000613856 STIM1Q13586 685 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 IQCB1Q15051 598 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 MTERF2Q49AM1 385 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 DAW1Q8N136 415 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 ADSSL1Q8N142 457 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
SLIRP-212ENST00000613856 PARVGQ9HBI0 331 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 GDAQ9Y2T3 454 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 PCDHA11Q9Y5I1 949 aa12.63□□□□□ -0.39
SLIRP-212ENST00000613856 UBE4BO95155 1302 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 EVPLQ92817 2033 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 ZBTB42B2RXF5 422 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 IKBKBO14920 756 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 KPNA6O60684 536 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 ATP2A2P16615 1042 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 STK4Q13043 487 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 EMC2Q15006 297 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 ZNF484Q5JVG2 852 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 TMEM31Q5JXX7 168 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 DEFB128Q7Z7B8 93 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 ALYREFQ86V81 257 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 JPH2Q9BR39 696 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 XPNPEP1Q9NQW7 623 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 TRMT13Q9NUP7 481 aaKnown RBP12.62□□□□□ -0.39
SLIRP-212ENST00000613856 HCN4Q9Y3Q4 1203 aa12.62□□□□□ -0.39
SLIRP-212ENST00000613856 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 H3BRB1 525 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 PSMA7O14818 248 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 LPXNO60711 386 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 KIF20AO95235 890 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 PLS3P13797 630 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 MARK3P27448 753 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 PRCPP42785 496 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 MRE11P49959 708 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 POLGP54098 1239 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 MYL5Q02045 173 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 TAP1Q03518 808 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 PAK1Q13153 545 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 UVSSAQ2YD98 709 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 TMCO2Q7Z6W1 182 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 DHX40Q8IX18 779 aaKnown RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 ENOX1Q8TC92 643 aaKnown RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 SLC7A3Q8WY07 619 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 ARNTL2Q8WYA1 636 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 KCNN1Q92952 543 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 SH2D3AQ9BRG2 576 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 TUT1Q9H6E5 874 aaKnown RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 GRPEL1Q9HAV7 217 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 SLC39A2Q9NP94 309 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 LARSQ9P2J5 1176 aaKnown RBP12.61□□□□□ -0.39
SLIRP-212ENST00000613856 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
SLIRP-212ENST00000613856 IGKV6-21A0A0C4DH24 114 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 LCHNA4D1U4 455 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 HAS3O00219 553 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 EIF3DO15371 548 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLIRP-212ENST00000613856 TBC1D8BQ0IIM8 1120 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 ALCAMQ13740 583 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 NCAPHQ15003 741 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
SLIRP-212ENST00000613856 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 MYOCDQ8IZQ8 938 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 KAT2BQ92831 832 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms