RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 CLEC4DQ8WXI8 215 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 RFFLQ8WZ73 363 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 SAMM50Q9Y512 469 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 DHX15O43143 795 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 TMEM253P0C7T8 217 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 RARRES1P49788 294 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 GHRHRQ02643 423 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 SPP2Q13103 211 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 ITGB3BPQ13352 177 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 TKFCQ3LXA3 575 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 PCNX4Q63HM2 1172 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 INTS8Q75QN2 995 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 NT5DC3Q86UY8 548 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 ZIM3Q96PE6 472 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 SYT11Q9BT88 431 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 AGO4Q9HCK5 861 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
TUBD1-216ENST00000613721 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
TUBD1-216ENST00000613721 CCDC188H7C350 402 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 PEX10O60683 326 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 SHOX2O60902 331 aaPredicted RBP12.96□□□□□ -0.33
TUBD1-216ENST00000613721 ALAS1P13196 640 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
TUBD1-216ENST00000613721 MTMR1Q13613 665 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 CFAP58Q5T655 872 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.33
TUBD1-216ENST00000613721 LPAR1Q92633 364 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 HES6Q96HZ4 224 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 ACCSQ96QU6 501 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
TUBD1-216ENST00000613721 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 UBIAD1Q9Y5Z9 338 aa12.96□□□□□ -0.33
TUBD1-216ENST00000613721 EMSYQ7Z589 1322 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 ABCB4P21439 1286 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 GUCY2FP51841 1108 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 CETN1Q12798 172 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 TNFAIP1Q13829 316 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 KIF22Q14807 665 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 EIF1ADQ8N9N8 165 aaKnown RBP12.96□□□□□ -0.34
TUBD1-216ENST00000613721 SLC35G2Q8TBE7 412 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 AP1M1Q9BXS5 423 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 ISCUQ9H1K1 167 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 SEPT11Q9NVA2 429 aaKnown RBP12.96□□□□□ -0.34
TUBD1-216ENST00000613721 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 AMFRQ9UKV5 643 aa12.96□□□□□ -0.34
TUBD1-216ENST00000613721 TISP43B9A030 160 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 KRIT1O00522 736 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-216ENST00000613721 LRRN2O75325 713 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 LYPLA2O95372 231 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 PLS3P13797 630 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 VCAM1P19320 739 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 DLG4P78352 724 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
TUBD1-216ENST00000613721 TTMPQ5BVD1 217 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 C12orf56Q8IXR9 622 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 IQCKQ8N0W5 287 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
TUBD1-216ENST00000613721 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
TUBD1-216ENST00000613721 P4HA2O15460 535 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 VAMP7P51809 220 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 CUL1Q13616 776 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 HLTFQ14527 1009 aaKnown RBP eCLIP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 TRADDQ15628 312 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 CBWD1Q9BRT8 395 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 DDX47Q9H0S4 455 aaKnown RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 FOXN3O00409 490 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 KRT14P02533 472 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
TUBD1-216ENST00000613721 PPATQ06203 517 aa12.94□□□□□ -0.34
TUBD1-216ENST00000613721 FOXR1Q6PIV2 292 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms