RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 LHX8Q68G74 356 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 CDCA2Q69YH5 1023 aaPredicted RBP22.24■■□□□ 1.15
CPNE9-205ENST00000613455 RHPN2Q8IUC4 686 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 SYCP3Q8IZU3 236 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 MRFAP1L1Q96HT8 127 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 PPP1R9BQ96SB3 815 aa22.24■■□□□ 1.15
CPNE9-205ENST00000613455 LRRC10BA6NIK2 292 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 TISP43B9A030 160 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 CLIC2O15247 247 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 MSCO60682 206 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 SCP2P22307 547 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 ADAM9Q13443 819 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 KCNA10Q16322 511 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 NFRKBQ6P4R8 1299 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 HS2ST1Q7LGA3 356 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 FAM114A1Q8IWE2 563 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 RNF149Q8NC42 400 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 ASGR1P07306 291 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 ABCD1P33897 745 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 GOLGA5Q8TBA6 731 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 MAGEC2Q9UBF1 373 aaPredicted RBP22.23■■□□□ 1.15
CPNE9-205ENST00000613455 HDAC6Q9UBN7 1215 aa22.23■■□□□ 1.15
CPNE9-205ENST00000613455 PHLPP2Q6ZVD8 1323 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 A0A1B0GTH6 734 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 SRGAP2CP0DJJ0 459 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 TMOD1P28289 359 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 FILIP1Q7Z7B0 1213 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 TMEM134Q9H6X4 195 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 DMAC2Q9NW81 257 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 TAB2Q9NYJ8 693 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 EXOC7Q9UPT5 735 aa22.22■■□□□ 1.15
CPNE9-205ENST00000613455 CETN3O15182 167 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 ASAP2O43150 1006 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 COPB1P53618 953 aaKnown RBP22.21■■□□□ 1.15
CPNE9-205ENST00000613455 SLC39A4Q6P5W5 647 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 CREBRFQ8IUR6 639 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 KIAA0319LQ8IZA0 1049 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 TMEM174Q8WUU8 243 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 NLRP4Q96MN2 994 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 CTAGE1Q96RT6 745 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 CCDC113Q9H0I3 377 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 CGNQ9P2M7 1197 aaKnown RBP22.21■■□□□ 1.15
CPNE9-205ENST00000613455 AKT3Q9Y243 479 aa22.21■■□□□ 1.15
CPNE9-205ENST00000613455 CBFA2T2O43439 604 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 VTNP04004 478 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 MYCNP04198 464 aaPredicted RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 EDN1P05305 212 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 RPL13P26373 211 aaKnown RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 CDC25BP30305 580 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 ZNF200P98182 395 aaPredicted RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 TFDP1Q14186 410 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 NBPF20Q3BBV1 942 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 RNF180Q86T96 592 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 SLC9A9Q8IVB4 645 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 C12orf56Q8IXR9 622 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 C7orf31Q8N865 590 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 PCSK9Q8NBP7 692 aaKnown RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 ANKRD20A12PQ8NF67 263 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 ZNF668Q96K58 619 aaPredicted RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 C17orf102A2RUQ5 167 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 ANKRD63C9JTQ0 380 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 TREHO43280 583 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 AKAP3O75969 853 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 EFNA5P52803 228 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 MARSP56192 900 aaKnown RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 SNRPFP62306 86 aaKnown RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 NR1I3Q14994 352 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 RUFY4Q6ZNE9 571 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.2■■□□□ 1.14
CPNE9-205ENST00000613455 MAP7D2Q96T17 732 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 CBWD1Q9BRT8 395 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 TUBGCP2Q9BSJ2 902 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 NFKBIZQ9BYH8 718 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 IFT122Q9HBG6 1241 aa22.2■■□□□ 1.14
CPNE9-205ENST00000613455 DNAH12Q6ZR08 3092 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 SMIM35A0A1B0GVV1 85 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 K7ERI5 159 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 GNA14O95837 355 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 HSPA8P11142 646 aaKnown RBP22.19■■□□□ 1.14
CPNE9-205ENST00000613455 ADSSP30520 456 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 CASP4P49662 377 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 PTENP60484 403 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 MYBPC2Q14324 1141 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 ZBTB8OSQ8IWT0 167 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 UNC93B1Q9H1C4 597 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 C2orf40Q9H1Z8 148 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 VPS16Q9H269 839 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 GTF2IRD1Q9UHL9 959 aa22.19■■□□□ 1.14
CPNE9-205ENST00000613455 GRIN2DO15399 1336 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 HNRNPDLO14979 420 aaKnown RBP22.18■■□□□ 1.14
CPNE9-205ENST00000613455 SLC16A3O15427 465 aaKnown RBP22.18■■□□□ 1.14
CPNE9-205ENST00000613455 PIGRP01833 764 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 CYP2C9P11712 490 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 MTIF2P46199 727 aaKnown RBP22.18■■□□□ 1.14
CPNE9-205ENST00000613455 CYP2J2P51589 502 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 POU5F1BQ06416 359 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 STRN3Q13033 797 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 SLC9C1Q4G0N8 1177 aa22.18■■□□□ 1.14
CPNE9-205ENST00000613455 MIIPQ5JXC2 388 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms