RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 CAPN9O14815 690 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 BNIP3LO60238 219 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 MFAP3LO75121 409 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 HIP1RO75146 1068 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 VIMP08670 466 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 ELNP15502 786 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 FGFR4P22455 802 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 RFX1P22670 979 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 PSMD2Q13200 908 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 KCTD19Q17RG1 926 aaPredicted RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 KCNV1Q6PIU1 500 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 PARP9Q8IXQ6 854 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 AK8Q96MA6 479 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 DAPK3O43293 454 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 GFPT2O94808 682 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 NR1D1P20393 614 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 ADORA2AP29274 412 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 SEPT7Q16181 437 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 SLC9C1Q4G0N8 1177 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 ARMC3Q5W041 872 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 MSANTD4Q8NCY6 345 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 SEPT1Q8WYJ6 367 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
FAM3A-221ENST00000612856 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
FAM3A-221ENST00000612856 ASB14A6NK59 587 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 VWA5AO00534 786 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 BMP6P22004 513 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 TCF7P36402 384 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 PRKCEQ02156 737 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 TNFAIP2Q03169 654 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 FAM133BQ5BKY9 247 aaKnown RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 SH3BP5LQ7L8J4 393 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 CACNA2D3Q8IZS8 1091 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 KLK14Q9P0G3 267 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 NLRP11P59045 1033 aaKnown RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 ZKSCAN8Q15776 578 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 SPATA1Q5VX52 437 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 APBB1IPQ7Z5R6 666 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 DEFB128Q7Z7B8 93 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 UBE2TQ9NPD8 197 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 AHDC1Q5TGY3 1603 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 MSH4O15457 936 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 IFNB1P01574 187 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 ICAM1P05362 532 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 PSMC5P62195 406 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 UBXN6Q9BZV1 441 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
FAM3A-221ENST00000612856 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
FAM3A-221ENST00000612856 hCG_1984214I3L0E3 225 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 PQBP1O60828 265 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 AP1G2O75843 785 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 NDUFA10O95299 355 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 PCK1P35558 622 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 MXI1P50539 228 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 COPB1P53618 953 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SREBF2Q12772 1141 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 STK4Q13043 487 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ZNF713Q8N859 430 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ACCSQ96QU6 501 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 PANX2Q96RD6 677 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 CCT8L2Q96SF2 557 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 MOV10L1Q9BXT6 1211 aaKnown RBP11.66□□□□□ -0.54
FAM3A-221ENST00000612856 ATP6V0A4Q9HBG4 840 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 RAB21Q9UL25 225 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 MYH3P11055 1940 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 PLCH1Q4KWH8 1693 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 LAD1O00515 517 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 VTNP04004 478 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 MYBL2P10244 700 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 CYP2C9P11712 490 aa11.66□□□□□ -0.54
FAM3A-221ENST00000612856 FUT2Q10981 343 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms