RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NFRKBQ6P4R8 1299 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 KCNV1Q6PIU1 500 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC121Q6ZUS5 278 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SMAP1Q8IYB5 467 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 TMEM35BQ8NCS4 154 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 EIF3CQ99613 913 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 PDCD2LQ9BRP1 358 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 POLR3CQ9BUI4 534 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 DLG5Q8TDM6 1919 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ADM5C9JUS6 153 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 GNAT1P11488 350 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FMO5P49326 533 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 GPC5P78333 572 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ITIH3Q06033 890 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ZNF211Q13398 564 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SHROOM1Q2M3G4 852 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 RBM43Q6ZSC3 357 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SCFD2Q8WU76 684 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 PBKQ96KB5 322 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 TARS2Q9BW92 718 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 HEMGNQ9BXL5 484 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SMARCAD1Q9H4L7 1026 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 LRFN2Q9ULH4 789 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ATP8A1Q9Y2Q0 1164 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CD2APQ9Y5K6 639 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FHOD1Q9Y613 1164 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FAM86B1E9PN63 330 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 PFASO15067 1338 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 AP5Z1O43299 807 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FAM86B2P0C5J1 330 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CLCN6P51797 869 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 EFNA5P52803 228 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 DUOXA2Q1HG44 320 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 WDR72Q3MJ13 1102 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FBXO38Q6PIJ6 1188 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FBF1Q8TES7 1133 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 NSMCE1Q8WV22 266 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 HAUS1Q96CS2 278 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 TRIM10Q9UDY6 481 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SOX5P35711 763 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 TNFAIP2Q03169 654 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CYP4F22Q6NT55 531 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 METTL23Q86XA0 190 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 PARK7Q99497 189 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 GCOM2Q9BZD3 368 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 KIAA1683Q9H0B3 1180 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ZWILCHQ9H900 591 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 GINM1Q9NU53 330 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 RNF14Q9UBS8 474 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CCDC151A5D8V7 595 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 FOXP2O15409 715 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 CETPP11597 493 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 GNA15P30679 374 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 TCF7P36402 384 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 RWDD2BP57060 319 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 KIAA1841Q6NSI8 718 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 TAOK1Q7L7X3 1001 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 CCNYQ8ND76 341 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 SLC38A10Q9HBR0 1119 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 DNAJC17Q9NVM6 304 aaKnown RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 KCND2Q9NZV8 630 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 TFR2Q9UP52 801 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 MAD1L1Q9Y6D9 718 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 CTSHP09668 335 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 MOXD1Q6UVY6 613 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 ELOA2Q8IYF1 753 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 SIX6OS1Q8N1H7 587 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 KCTD6Q8NC69 237 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 GPRASP2Q96D09 838 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 KIF12Q96FN5 646 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 PRPSAP2O60256 369 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 ECEL1O95672 775 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 GH1P01241 217 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 ATP1A1P05023 1023 aaKnown RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 PSMA2P25787 234 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 CASP4P49662 377 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 MRPS9P82933 396 aaKnown RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 DHX9Q08211 1270 aaKnown RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 SEZ6Q53EL9 994 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 PPP6R3Q5H9R7 873 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-218ENST00000610726 HHATQ5VTY9 493 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 EDEM3Q9BZQ6 932 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 APEX2Q9UBZ4 518 aa7.81□□□□□ -1.16
CSDE1-218ENST00000610726 VWA5AO00534 786 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 EVI5O60447 810 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ZRANB2O95218 330 aaKnown RBP eCLIP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PNMA6AP0CW24 399 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 FKBP1AP62942 108 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ADCY1Q08828 1119 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ITKQ08881 620 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 GIT2Q14161 759 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 MFSD14CQ5VZR4 134 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 TTC19Q6DKK2 380 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 XRRA1Q6P2D8 792 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 GJB7Q6PEY0 223 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ARMCX2Q7L311 632 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms