RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 SRGAP2CP0DJJ0 459 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 BCAR1P56945 870 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 KRT17Q04695 432 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 TMC7Q7Z402 723 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 C4orf19Q8IY42 314 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 SLC7A3Q8WY07 619 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 TRAIPQ9BWF2 469 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 APOL5Q9BWW9 433 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 MINDY3Q9H8M7 445 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 INPP5FQ9Y2H2 1132 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 SEC24BO95487 1268 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 YWHABP31946 246 aaKnown RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 RFC5P40937 340 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 TECP42680 631 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 NEK4P51957 841 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 LAMTOR4Q0VGL1 99 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 KCNC3Q14003 757 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 EMC2Q15006 297 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 XKR9Q5GH70 373 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 TMEM173Q86WV6 379 aaPredicted RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 PSPC1Q8WXF1 523 aaKnown RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 BRMS1Q9HCU9 246 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 NGRNQ9NPE2 291 aaKnown RBP17.89■□□□□ 0.45
SGMS1-209ENST00000609445 FAM105AQ9NUU6 356 aa17.89■□□□□ 0.45
SGMS1-209ENST00000609445 BTBD18B2RXH4 712 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 LOC730098B7Z3J9 87 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
SGMS1-209ENST00000609445 HERC4Q5GLZ8 1057 aaPredicted RBP17.88■□□□□ 0.45
SGMS1-209ENST00000609445 NOMO2Q5JPE7 1267 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 TPH2Q8IWU9 490 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 DIS3L2Q8IYB7 885 aaKnown RBP17.88■□□□□ 0.45
SGMS1-209ENST00000609445 SLFN12Q8IYM2 578 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 EIF2AK1Q9BQI3 630 aaKnown RBP17.88■□□□□ 0.45
SGMS1-209ENST00000609445 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 AGPAT5Q9NUQ2 364 aa17.88■□□□□ 0.45
SGMS1-209ENST00000609445 ZNF318Q5VUA4 2279 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 FSD2A1L4K1 749 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 C2orf71A6NGG8 1288 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 B4GALT3O60512 393 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 OFD1O75665 1012 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 SLITRK3O94933 977 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 SKIP12755 728 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 CA8P35219 290 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 ALDH7A1P49419 539 aaKnown RBP17.87■□□□□ 0.45
SGMS1-209ENST00000609445 CALCRLQ16602 461 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 SYCE2Q6PIF2 218 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 GLB1LQ6UWU2 654 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 TMEM184AQ6ZMB5 413 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 OTUD6AQ7L8S5 288 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 BCL7CQ8WUZ0 217 aaPredicted RBP17.87■□□□□ 0.45
SGMS1-209ENST00000609445 AUTS2Q8WXX7 1259 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 SUSD6Q92537 303 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 RPGRIP1Q96KN7 1286 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 PHF7Q9BWX1 381 aaPredicted RBP17.87■□□□□ 0.45
SGMS1-209ENST00000609445 GBP3Q9H0R5 595 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 S1PR5Q9H228 398 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 NRDE2Q9H7Z3 1164 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 XPNPEP1Q9NQW7 623 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 TBC1D13Q9NVG8 400 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 DNAJB4Q9UDY4 337 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 CDH22Q9UJ99 828 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 PPME1Q9Y570 386 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
SGMS1-209ENST00000609445 ZNF623O75123 536 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 HOXA11P31270 313 aaPredicted RBP17.86■□□□□ 0.45
SGMS1-209ENST00000609445 RAB27AP51159 221 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
SGMS1-209ENST00000609445 UBXN11Q5T124 520 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 AGMOQ6ZNB7 445 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 SRGAP1Q7Z6B7 1085 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 FERMT3Q86UX7 667 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 EXOC8Q8IYI6 725 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 MRPL43Q8N983 215 aaKnown RBP17.86■□□□□ 0.45
SGMS1-209ENST00000609445 RNF149Q8NC42 400 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 TMEM169Q96HH4 297 aa17.86■□□□□ 0.45
SGMS1-209ENST00000609445 A0A087WWV3 80 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 CLASP2O75122 1294 aaKnown RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 CXCL14O95715 111 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 SRGAP2BP0DMP2 458 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 TXKP42681 527 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 SLC11A1P49279 550 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 AFF1P51825 1210 aaKnown RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 GUCY1B3Q02153 619 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 CBX2Q14781 532 aaPredicted RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 HFE2Q6ZVN8 426 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 ZNF280BQ86YH2 543 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 MTRQ99707 1265 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 TTC12Q9H892 705 aaPredicted RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 PCDHA12Q9UN75 941 aa17.85■□□□□ 0.45
SGMS1-209ENST00000609445 ARIH1Q9Y4X5 557 aaPredicted RBP17.85■□□□□ 0.45
SGMS1-209ENST00000609445 GAS2O43903 313 aaKnown RBP17.84■□□□□ 0.45
SGMS1-209ENST00000609445 NEMFO60524 1076 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms