RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PHOX2BQ99453 314 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 ADAM7Q9H2U9 754 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 FAM105AQ9NUU6 356 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 DZANK1Q9NVP4 752 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 CARNS1A5YM72 827 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 C2CD4DB7Z1M9 353 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
CTSA-216ENST00000607212 GIT2Q14161 759 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 ATAT1Q5SQI0 421 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 GALNT17Q6IS24 598 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 CABP7Q86V35 215 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 ATOH1Q92858 354 aaPredicted RBP16.65■□□□□ 0.26
CTSA-216ENST00000607212 CEP170P1Q96L14 293 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 AIFM3Q96NN9 605 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 NRDE2Q9H7Z3 1164 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 FAM86C1Q9NVL1 165 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 KCNJ14Q9UNX9 436 aa16.65■□□□□ 0.26
CTSA-216ENST00000607212 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
CTSA-216ENST00000607212 CDKL5O76039 1030 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 SRGAP2CP0DJJ0 459 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 XBP1P17861 261 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 CYP3A7P24462 503 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 AVPR2P30518 371 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 QARSP47897 775 aaKnown RBP16.64■□□□□ 0.25
CTSA-216ENST00000607212 NCAPH2Q6IBW4 605 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 MOXD1Q6UVY6 613 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 DDX53Q86TM3 631 aaKnown RBP16.64■□□□□ 0.25
CTSA-216ENST00000607212 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 ETNPPLQ8TBG4 499 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 ASIC4Q96FT7 647 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 IGSF21Q96ID5 467 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 ZBP1Q9H171 429 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 CYP26B1Q9NR63 512 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 COL4A3BPQ9Y5P4 624 aa16.64■□□□□ 0.25
CTSA-216ENST00000607212 PIEZO1Q92508 2521 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 IGKV6-21A0A0C4DH24 114 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 SLC37A4O43826 429 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 CCNT1O60563 726 aaKnown RBP16.63■□□□□ 0.25
CTSA-216ENST00000607212 GALTP07902 379 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 CTSAP10619 480 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 EPCAMP16422 314 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 NPEPPSP55786 919 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 EVCP57679 992 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 ANO5Q75V66 913 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
CTSA-216ENST00000607212 UBALD2Q8IYN6 164 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 PSPC1Q8WXF1 523 aaKnown RBP16.63■□□□□ 0.25
CTSA-216ENST00000607212 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 ZNF274Q96GC6 653 aaPredicted RBP16.63■□□□□ 0.25
CTSA-216ENST00000607212 EMILIN2Q9BXX0 1053 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 IRF2BPLQ9H1B7 796 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
CTSA-216ENST00000607212 MEIS3P2A8K0S8 358 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 EML1O00423 815 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 OFD1O75665 1012 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 ERLIN2O94905 339 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 STBD1O95210 358 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 PDGFBP01127 241 aaPredicted RBP16.62■□□□□ 0.25
CTSA-216ENST00000607212 ASGR2P07307 311 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 KLRC2P26717 231 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 SLC11A1P49279 550 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 TCF15Q12870 199 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 KIAA1841Q6NSI8 718 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 EXOC8Q8IYI6 725 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
CTSA-216ENST00000607212 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
CTSA-216ENST00000607212 C2CD2LO14523 706 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
CTSA-216ENST00000607212 POMCP01189 267 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 P4HBP07237 508 aaKnown RBP16.61■□□□□ 0.25
CTSA-216ENST00000607212 PPP2R5CQ13362 524 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
CTSA-216ENST00000607212 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
CTSA-216ENST00000607212 FAM20AQ96MK3 541 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 CEP89Q96ST8 783 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
CTSA-216ENST00000607212 LXNQ9BS40 222 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 AGPAT5Q9NUQ2 364 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 LIMD1Q9UGP4 676 aa16.61■□□□□ 0.25
CTSA-216ENST00000607212 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms