RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 ZNF410Q86VK4 478 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 CATSPER3Q86XQ3 398 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 RHPN2Q8IUC4 686 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 SAMD11Q96NU1 681 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 C17orf80Q9BSJ5 609 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 POLR3CQ9BUI4 534 aaPredicted RBP11.13□□□□□ -0.63
CTSA-215ENST00000607187 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
CTSA-215ENST00000607187 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 MTUS1Q9ULD2 1270 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
CTSA-215ENST00000607187 ADGRA3Q8IWK6 1321 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 NCOR1O75376 2440 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 A0A087WZ62 844 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 DENND3A2RUS2 1198 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 C9IYK1 514 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 MED24O75448 989 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 LINC00271P0C7V0 271 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 RPA1P27694 616 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 RARRES1P49788 294 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 FAM189BP81408 668 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 GRB10Q13322 594 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 EMC2Q15006 297 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 EPC2Q52LR7 807 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 KSR1Q8IVT5 923 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 PIGOQ8TEQ8 1089 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 TCP11Q8WWU5 503 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 PRPF31Q8WWY3 499 aaKnown RBP11.12□□□□□ -0.63
CTSA-215ENST00000607187 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
CTSA-215ENST00000607187 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
CTSA-215ENST00000607187 TMEM143Q96AN5 459 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 SCLT1Q96NL6 688 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 FDXACB1Q9BRP7 624 aaPredicted RBP11.12□□□□□ -0.63
CTSA-215ENST00000607187 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
CTSA-215ENST00000607187 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 COL4A3BPQ9Y5P4 624 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 MTCH2Q9Y6C9 303 aa11.12□□□□□ -0.63
CTSA-215ENST00000607187 A0A087WWV3 80 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 LAD1O00515 517 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 CSDE1O75534 798 aaKnown RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 DGAT1O75907 488 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 MUTP22033 750 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 FGFR4P22455 802 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 PRPHP41219 470 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 LAMTOR4Q0VGL1 99 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 BTG3Q14201 252 aaPredicted RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 PDIA5Q14554 519 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 TMEM192Q8IY95 271 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 CMTR2Q8IYT2 770 aaKnown RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 FIBCD1Q8N539 461 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 ERMNQ8TAM6 284 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 GDPD5Q8WTR4 605 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 NLRP4Q96MN2 994 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 MTRQ99707 1265 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 ELAC1Q9H777 363 aaKnown RBP11.11□□□□□ -0.63
CTSA-215ENST00000607187 XPNPEP1Q9NQW7 623 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 LRFN2Q9ULH4 789 aa11.11□□□□□ -0.63
CTSA-215ENST00000607187 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 H3BNC9 293 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 ASAP2O43150 1006 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 NUDT7P0C024 238 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 SRGAP2CP0DJJ0 459 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 SFPQP23246 707 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTSA-215ENST00000607187 MXD4Q14582 209 aaPredicted RBP11.1□□□□□ -0.63
CTSA-215ENST00000607187 CCDC85BQ15834 202 aaPredicted RBP11.1□□□□□ -0.63
CTSA-215ENST00000607187 IL17AQ16552 155 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 HAUS3Q68CZ6 603 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 POTEGQ6S5H5 508 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 NUDT18Q6ZVK8 323 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTSA-215ENST00000607187 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 PPM1EQ8WY54 764 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
CTSA-215ENST00000607187 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 CHST12Q9NRB3 414 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 TMEM161AQ9NX61 479 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
CTSA-215ENST00000607187 DBR1Q9UK59 544 aaKnown RBP11.1□□□□□ -0.63
CTSA-215ENST00000607187 RWDD3Q9Y3V2 267 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 PLXNA4Q9HCM2 1894 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 MYH11P35749 1972 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
CTSA-215ENST00000607187 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 K7ELQ4 463 aaPredicted RBP11.09□□□□□ -0.63
CTSA-215ENST00000607187 GABBR2O75899 941 aa11.09□□□□□ -0.63
CTSA-215ENST00000607187 RB1P06400 928 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms