RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 KRBA1A5PL33 1030 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 N4BP1O75113 896 aaKnown RBP16.88■□□□□ 0.29
SSBP4-214ENST00000607020 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
SSBP4-214ENST00000607020 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSBP4-214ENST00000607020 SFNP31947 248 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 TWF2Q6IBS0 349 aaKnown RBP16.88■□□□□ 0.29
SSBP4-214ENST00000607020 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 DGLUCYQ7Z3D6 616 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 LPPQ93052 612 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 C6orf50Q9HD87 102 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 WDR6Q9NNW5 1121 aaKnown RBP16.88■□□□□ 0.29
SSBP4-214ENST00000607020 DNAJB4Q9UDY4 337 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
SSBP4-214ENST00000607020 MED19A0JLT2 244 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 ADAMTS3O15072 1205 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 NARSO43776 548 aaKnown RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 C1RP00736 705 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 ALDH2P05091 517 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 DNM2P50570 870 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 JAK3P52333 1124 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 RNASELQ05823 741 aaKnown RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 DRP2Q13474 957 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 PUM1Q14671 1186 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 MRPL10Q7Z7H8 261 aaKnown RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 ZNF280BQ86YH2 543 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 SLC44A3Q8N4M1 653 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 RDM1Q8NG50 284 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 STAMQ92783 540 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 PGBD4Q96DM1 585 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 TMEM175Q9BSA9 504 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 MRPL17Q9NRX2 175 aaKnown RBP16.87■□□□□ 0.29
SSBP4-214ENST00000607020 KANSL3Q9P2N6 904 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 DPP7Q9UHL4 492 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 SSX2IPQ9Y2D8 614 aa16.87■□□□□ 0.29
SSBP4-214ENST00000607020 NCOR2Q9Y618 2525 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 A0A087WZ62 844 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 MEIS3P2A8K0S8 358 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 MSH4O15457 936 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 EDIL3O43854 480 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 B4GALT3O60512 393 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 STBD1O95210 358 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 SRFP11831 508 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 GNA11P29992 359 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 CDC27P30260 824 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 UGCGQ16739 394 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 XKR3Q5GH77 459 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 REXO1Q8N1G1 1221 aaKnown RBP16.86■□□□□ 0.29
SSBP4-214ENST00000607020 BORCS6Q96GS4 357 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
SSBP4-214ENST00000607020 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 DLL3Q9NYJ7 618 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 DLGAP2Q9P1A6 1054 aa16.86■□□□□ 0.29
SSBP4-214ENST00000607020 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 DDHD2O94830 711 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 EFEMP2O95967 443 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 CFHP08603 1231 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 USP11P51784 963 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 TSGA10IPQ3SY00 556 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 ELMSAN1Q6PJG2 1045 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 ZC3H14Q6PJT7 736 aaKnown RBP16.85■□□□□ 0.29
SSBP4-214ENST00000607020 AGMOQ6ZNB7 445 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 SLC5A5Q92911 643 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 RXFP1Q9HBX9 757 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
SSBP4-214ENST00000607020 INPP5FQ9Y2H2 1132 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 FAN1Q9Y2M0 1017 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 PCDHB2Q9Y5E7 798 aa16.85■□□□□ 0.29
SSBP4-214ENST00000607020 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 STK25O00506 426 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 MAFO75444 373 aaPredicted RBP16.84■□□□□ 0.29
SSBP4-214ENST00000607020 SOD2P04179 222 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 ADH1AP07327 375 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 SP9P0CG40 484 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 ADD1P35611 737 aaKnown RBP16.84■□□□□ 0.29
SSBP4-214ENST00000607020 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 KIAA2013Q8IYS2 634 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 URGCPQ8TCY9 931 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 RSAD2Q8WXG1 361 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 RUBCNQ92622 972 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 GBP3Q9H0R5 595 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 TBC1D17Q9HA65 648 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 MAN1C1Q9NR34 630 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 SUCLA2Q9P2R7 463 aaPredicted RBP16.84■□□□□ 0.29
SSBP4-214ENST00000607020 R4GN57 208 aa16.84■□□□□ 0.29
SSBP4-214ENST00000607020 ANHXE9PGG2 379 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 NRP1O14786 923 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
SSBP4-214ENST00000607020 GAS7O60861 476 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms