RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 DEPTORQ8TB45 409 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 GOLGA5Q8TBA6 731 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 ZNF333Q96JL9 665 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 CEP63Q96MT8 703 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 CRISPLD2Q9H0B8 497 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 CCDC113Q9H0I3 377 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 C2orf40Q9H1Z8 148 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 FANCLQ9NW38 375 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 GRIN2DO15399 1336 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 DENND3A2RUS2 1198 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 CCDC169A6NNP5 214 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 CALUO43852 315 aaPredicted RBP18.14■□□□□ 0.49
PMF1-206ENST00000606952 RPLP2P05387 115 aaKnown RBP18.14■□□□□ 0.49
PMF1-206ENST00000606952 CCL5P13501 91 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 EFNA5P52803 228 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 PTENP60484 403 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 FKBP3Q00688 224 aaKnown RBP18.14■□□□□ 0.49
PMF1-206ENST00000606952 KCNA1Q09470 495 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 MTFR1Q15390 333 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 RPAINQ86UA6 219 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 IRF2BP1Q8IU81 584 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 MAP7D2Q96T17 732 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 KIFC3Q9BVG8 833 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 GBP3Q9H0R5 595 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 EXOC7Q9UPT5 735 aa18.14■□□□□ 0.49
PMF1-206ENST00000606952 LRRIQ4A6NIV6 560 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 DNM1LO00429 736 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 FGFR1OPO95684 399 aaKnown RBP18.13■□□□□ 0.49
PMF1-206ENST00000606952 CAPN2P17655 700 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 MARSP56192 900 aaKnown RBP18.13■□□□□ 0.49
PMF1-206ENST00000606952 SPAG1Q07617 926 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 TAF2Q6P1X5 1199 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 NME8Q8N427 588 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 CSGALNACT2Q8N6G5 542 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 METTL13Q8N6R0 699 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 ZBTB10Q96DT7 871 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 SAMSN1Q9NSI8 373 aaKnown RBP18.13■□□□□ 0.49
PMF1-206ENST00000606952 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 CENPFP49454 3210 aa18.13■□□□□ 0.49
PMF1-206ENST00000606952 TREHO43280 583 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 CYP2C9P11712 490 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 EEF1GP26641 437 aaKnown RBP18.12■□□□□ 0.49
PMF1-206ENST00000606952 GPC3P51654 580 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 MCCD1P59942 119 aaPredicted RBP18.12■□□□□ 0.49
PMF1-206ENST00000606952 FAM187BQ17R55 369 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 HS2ST1Q7LGA3 356 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 FILIP1Q7Z7B0 1213 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 RHPN2Q8IUC4 686 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 FAM114A1Q8IWE2 563 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 ZBTB8OSQ8IWT0 167 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 RNF149Q8NC42 400 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 CTAGE1Q96RT6 745 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 FZD8Q9H461 694 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 IFT122Q9HBG6 1241 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 AGPAT3Q9NRZ7 376 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 STYXL1Q9Y6J8 313 aa18.12■□□□□ 0.49
PMF1-206ENST00000606952 A0A1W2PQ45 241 aaPredicted RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 A0A1W2PQY0 241 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 LRRC10BA6NIK2 292 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 AP5Z1O43299 807 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 PHKA2P46019 1235 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 ITGA7Q13683 1181 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 TPD52L1Q16890 204 aaPredicted RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 GDF6Q6KF10 455 aaPredicted RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 ZPBP2Q6X784 338 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 RUFY4Q6ZNE9 571 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 APTXQ7Z2E3 356 aaKnown RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 SERINC5Q86VE9 423 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 KSR1Q8IVT5 923 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 GLT1D1Q96MS3 346 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 MKNK1Q9BUB5 465 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 SRRTQ9BXP5 876 aaKnown RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 RNF208Q9H0X6 261 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 LIMA1Q9UHB6 759 aaKnown RBP18.11■□□□□ 0.49
PMF1-206ENST00000606952 AKT3Q9Y243 479 aa18.11■□□□□ 0.49
PMF1-206ENST00000606952 A0A0U1RQG5 324 aaPredicted RBP18.1■□□□□ 0.49
PMF1-206ENST00000606952 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 K7ERI5 159 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 SLC16A3O15427 465 aaKnown RBP18.1■□□□□ 0.49
PMF1-206ENST00000606952 GPR32O75388 356 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 GNA14O95837 355 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 NR3C1P04150 777 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 GJB1P08034 283 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 RPL13P26373 211 aaKnown RBP18.1■□□□□ 0.49
PMF1-206ENST00000606952 MBTD1Q05BQ5 628 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 PCBP1Q15365 356 aaKnown RBP eCLIP18.1■□□□□ 0.49
PMF1-206ENST00000606952 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 PRIMPOLQ96LW4 560 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 DEFB118Q96PH6 123 aa18.1■□□□□ 0.49
PMF1-206ENST00000606952 KIAA0391O15091 583 aaKnown RBP18.09■□□□□ 0.49
PMF1-206ENST00000606952 CETN3O15182 167 aa18.09■□□□□ 0.49
PMF1-206ENST00000606952 MAPK13O15264 365 aa18.09■□□□□ 0.49
PMF1-206ENST00000606952 ATP1A3P13637 1013 aa18.09■□□□□ 0.49
PMF1-206ENST00000606952 GARTP22102 1010 aa18.09■□□□□ 0.49
PMF1-206ENST00000606952 NR2F2P24468 414 aa18.09■□□□□ 0.49
PMF1-206ENST00000606952 ZNF200P98182 395 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms