RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 XXYLT1Q8NBI6 393 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 SLC35C1Q96A29 364 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 C16orf70Q9BSU1 422 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 PCIF1Q9H4Z3 704 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 HSPBP1Q9NZL4 362 aa23.61■■□□□ 1.37
USP6NL-204ENST00000606752 LRRIQ4A6NIV6 560 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 IGHA2P01877 340 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 CTGFP29279 349 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 TCERG1LQ5VWI1 586 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 TAS1R3Q7RTX0 852 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 PRPF31Q8WWY3 499 aaKnown RBP23.6■■□□□ 1.37
USP6NL-204ENST00000606752 DNAJC7Q99615 494 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 SUGCTQ9HAC7 445 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 AGPAT5Q9NUQ2 364 aa23.6■■□□□ 1.37
USP6NL-204ENST00000606752 ANKRD63C9JTQ0 380 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 ADCY6O43306 1168 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 MMP3P08254 477 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 FCGRTP55899 365 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 ZBED6P86452 979 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 MXD4Q14582 209 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 DGKDQ16760 1214 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 TSR1Q2NL82 804 aaKnown RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 E4F1Q66K89 784 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 ZNF397Q8NF99 534 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 CAPNS2Q96L46 248 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 FAM207AQ9NSI2 230 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 ZNF215Q9UL58 517 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 GNEQ9Y223 722 aaKnown RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 MAPK13O15264 365 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 AOC2O75106 756 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 ADSSP30520 456 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 STRN3Q13033 797 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 MKRN4PQ13434 485 aaPredicted RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 DRP2Q13474 957 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 CCAR2Q8N163 923 aaKnown RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 RDH13Q8NBN7 331 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 NEK11Q8NG66 645 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 PSPC1Q8WXF1 523 aaKnown RBP23.59■■□□□ 1.37
USP6NL-204ENST00000606752 EDEM3Q9BZQ6 932 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 TMEM134Q9H6X4 195 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
USP6NL-204ENST00000606752 H3BRB1 525 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 K7ERI5 159 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 DYNC1LI2O43237 492 aaPredicted RBP23.58■■□□□ 1.37
USP6NL-204ENST00000606752 INSRRP14616 1297 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 PSMC4P43686 418 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 CAPSQ13938 189 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 TMTC1Q8IUR5 882 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 TRAPPC12Q8WVT3 735 aa23.58■■□□□ 1.37
USP6NL-204ENST00000606752 TUT1Q9H6E5 874 aaKnown RBP23.58■■□□□ 1.37
USP6NL-204ENST00000606752 HNRNPDLO14979 420 aaKnown RBP23.57■■□□□ 1.36
USP6NL-204ENST00000606752 ADCY3O60266 1144 aa23.57■■□□□ 1.36
USP6NL-204ENST00000606752 ZNF286BP0CG31 522 aa23.57■■□□□ 1.36
USP6NL-204ENST00000606752 SLC39A4Q6P5W5 647 aa23.57■■□□□ 1.36
USP6NL-204ENST00000606752 INTS8Q75QN2 995 aaKnown RBP23.57■■□□□ 1.36
USP6NL-204ENST00000606752 LRRC71Q8N4P6 559 aa23.57■■□□□ 1.36
USP6NL-204ENST00000606752 CRACR2AQ9BSW2 395 aa23.57■■□□□ 1.36
USP6NL-204ENST00000606752 EPHB6O15197 1021 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 KRT13P13646 458 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 LACTBP83111 547 aaPredicted RBP23.56■■□□□ 1.36
USP6NL-204ENST00000606752 BFSP1Q12934 665 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 BICD1Q96G01 975 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 SUCLA2Q9P2R7 463 aaPredicted RBP23.56■■□□□ 1.36
USP6NL-204ENST00000606752 GTPBP10A4D1E9 387 aaKnown RBP23.56■■□□□ 1.36
USP6NL-204ENST00000606752 A6NJR5 290 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 GARTP22102 1010 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 EFNA5P52803 228 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 LAMTOR4Q0VGL1 99 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 EFCAB12Q6NXP0 572 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 CYP26C1Q6V0L0 522 aa23.56■■□□□ 1.36
USP6NL-204ENST00000606752 LSM14BQ9BX40 385 aaKnown RBP23.56■■□□□ 1.36
USP6NL-204ENST00000606752 COL1A2P08123 1366 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 SOWAHDA6NJG2 315 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 MAGEB2O15479 319 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 C22orf31O95567 290 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 PIGRP01833 764 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 LIG4P49917 911 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 EXOC3L4Q17RC7 722 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 POMGNT1Q8WZA1 660 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 ARHGAP39Q9C0H5 1083 aa23.55■■□□□ 1.36
USP6NL-204ENST00000606752 TRMT1Q9NXH9 659 aaKnown RBP23.55■■□□□ 1.36
USP6NL-204ENST00000606752 USP27XA6NNY8 438 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 CCP110O43303 1012 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 APLP1P51693 650 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 IGBP1P78318 339 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 MEA1Q16626 185 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 GBP6Q6ZN66 633 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 TLK2Q86UE8 772 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 METTL13Q8N6R0 699 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 FBXL18Q96ME1 805 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 ZNHIT6Q9NWK9 470 aaKnown RBP23.54■■□□□ 1.36
USP6NL-204ENST00000606752 Q9Y3F1 56 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 ASAP2O43150 1006 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 NOL4O94818 638 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 KLRC1P26715 233 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 VAMP7P51809 220 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 MCCD1P59942 119 aaPredicted RBP23.54■■□□□ 1.36
USP6NL-204ENST00000606752 ZSWIM2Q8NEG5 633 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 PLCB1Q9NQ66 1216 aa23.54■■□□□ 1.36
USP6NL-204ENST00000606752 CEP72Q9P209 647 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms