RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TRPV2Q9Y5S1 764 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 DENND3A2RUS2 1198 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 M0QZ92 97 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ASAP2O43150 1006 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ABCB7O75027 752 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 CAND2O75155 1236 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 RHOBTB3O94955 611 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 GCNT3O95395 438 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 RPLP2P05387 115 aaKnown RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 IQCF3P0C7M6 154 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 GHRP10912 638 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 DARSP14868 501 aaKnown RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 SELPP16109 830 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 BMP6P22004 513 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ITGB8P26012 769 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 CRYBB1P53674 252 aaPredicted RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 CCL23P55773 120 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 STK4Q13043 487 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 BFSP2Q13515 415 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 LPIN1Q14693 890 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 KCNB1Q14721 858 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 FAM26DQ5JW98 314 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 NT5DC1Q5TFE4 455 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 RBM43Q6ZSC3 357 aaKnown RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 TAS1R3Q7RTX0 852 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 HAUS6Q7Z4H7 955 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ZNF410Q86VK4 478 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ZBTB8OSQ8IWT0 167 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 KIAA0895Q8NCT3 520 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 TMEM161BQ8NDZ6 487 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 SYAP1Q96A49 352 aaPredicted RBP8.47□□□□□ -1.05
MSH6-211ENST00000606499 SCLYQ96I15 445 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 HTATIP2Q9BUP3 242 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 CCDC113Q9H0I3 377 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 IKZF4Q9H2S9 585 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ARHGAP28Q9P2N2 729 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 MAN1B1Q9UKM7 699 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 PHLPP2Q6ZVD8 1323 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 ZMYM2Q9UBW7 1377 aa8.47□□□□□ -1.05
MSH6-211ENST00000606499 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 INO80B-WBP1J3KQ70 363 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 KIAA0355O15063 1070 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 B4GALT5O43286 388 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 EVI5O60447 810 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 PPP1R37O75864 691 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 PRKCBP05771 671 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 SYN1P17600 705 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 SMTNP53814 917 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 PTENP60484 403 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 POU5F1BQ06416 359 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 KCNA1Q09470 495 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 MORC3Q14149 939 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 GPNMBQ14956 572 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 AMHR2Q16671 573 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 FBXO47Q5MNV8 452 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 FAM228AQ86W67 206 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 IFNLR1Q8IU57 520 aaPredicted RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 CCDC47Q96A33 483 aaKnown RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 NTPCRQ9BSD7 190 aaKnown RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 STRA6Q9BX79 667 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 NFKBIZQ9BYH8 718 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 GCOM2Q9BZD3 368 aaPredicted RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 INO80BQ9C086 356 aaPredicted RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 C2orf40Q9H1Z8 148 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 MAPK8IP1Q9UQF2 711 aa8.46□□□□□ -1.06
MSH6-211ENST00000606499 NOC2LQ9Y3T9 749 aaKnown RBP8.46□□□□□ -1.06
MSH6-211ENST00000606499 PTPRSQ13332 1948 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 SYCE3A1L190 88 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 TISP43B9A030 160 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 K7ERI5 159 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 TSPAN1O60635 241 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 NBNO60934 754 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 PRPF6O94906 941 aaKnown RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 TIMP1P01033 207 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 RAG1P15918 1043 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 CD52P31358 61 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 HOXD13P35453 343 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 EFNA5P52803 228 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 GTF2BQ00403 316 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 CDC42EP1Q00587 391 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 PSMD2Q13200 908 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 TCTN1Q2MV58 587 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 DPCR1Q3MIW9 517 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 ZSCAN23Q3MJ62 389 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 L1TD1Q5T7N2 865 aaKnown RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 ZNF658Q5TYW1 1059 aaPredicted RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms